C18orf21 (chromosome 18 open reading frame 21)

2014-11-01  

Identity

HGNC
C18orf21
LOCATION
18q12.2
LOCUSID
83608
ALIAS
HsT3108,PNAS-124,PNAS-131,XTP13

Other Information

Locus ID:

NCBI: 83608
HGNC: 28802
Ensembl: ENSG00000141428

Variants:

dbSNP: 83608
ClinVar: 83608
TCGA: ENSG00000141428
COSMIC: C18orf21

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000141428ENST00000269194L7N2F3
ENSG00000141428ENST00000333234Q32NC0
ENSG00000141428ENST00000333234W4VSQ2
ENSG00000141428ENST00000587873K7EM84
ENSG00000141428ENST00000592875Q32NC0
ENSG00000141428ENST00000610527Q32NC0
ENSG00000141428ENST00000610527W4VSQ2
ENSG00000141428ENST00000618334A0A087X0E7

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

C18orf21 (chromosome 18 open reading frame 21)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61011