CLEC18A (C-type lectin domain family 18 member A)

2014-11-01  

Identity

HGNC
CLEC18A
LOCATION
16q22.1
LOCUSID
348174
ALIAS
MRCL,MRCL1,MRLP2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 348174
MIM: 616571
HGNC: 30388
Ensembl: ENSG00000157322

Variants:

dbSNP: 348174
ClinVar: 348174
TCGA: ENSG00000157322
COSMIC: CLEC18A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000157322ENST00000288040A5D8T8
ENSG00000157322ENST00000393701A5D8T8
ENSG00000157322ENST00000449317F8W692
ENSG00000157322ENST00000561889H3BNR9
ENSG00000157322ENST00000568461A5D8T8
ENSG00000157322ENST00000615430A5D8T8

Expression (GTEx)

0
1
2
3
4
5
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
357171712022Human rs75776403 polymorphism links differential phenotypic and clinical outcomes to a CLEC18A p.T151M-driven multiomics.1
357171712022Human rs75776403 polymorphism links differential phenotypic and clinical outcomes to a CLEC18A p.T151M-driven multiomics.1
336031902021Endosomal TLR3 co-receptor CLEC18A enhances host immune response to viral infection.7
336031902021Endosomal TLR3 co-receptor CLEC18A enhances host immune response to viral infection.7
300556052018The human C-type lectin 18 is a potential biomarker in patients with chronic hepatitis B virus infection.6
304708012018Association of C-type lectin 18 levels with extrahepatic manifestations in chronic HCV infection.5
300556052018The human C-type lectin 18 is a potential biomarker in patients with chronic hepatitis B virus infection.6
304708012018Association of C-type lectin 18 levels with extrahepatic manifestations in chronic HCV infection.5
261704552015Human CLEC18 Gene Cluster Contains C-type Lectins with Differential Glycan-binding Specificity.14
261704552015Human CLEC18 Gene Cluster Contains C-type Lectins with Differential Glycan-binding Specificity.14

Citation

Dessen P

CLEC18A (C-type lectin domain family 18 member A)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61867/tumors-explorer/favicon/meetings/