LRRTM4 (leucine rich repeat transmembrane neuronal 4)

2014-11-01  

Identity

HGNC
LRRTM4
LOCATION
2p12
LOCUSID
80059
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 80059
MIM: 610870
HGNC: 19411
Ensembl: ENSG00000176204

Variants:

dbSNP: 80059
ClinVar: 80059
TCGA: ENSG00000176204
COSMIC: LRRTM4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000176204ENST00000409088Q86VH4
ENSG00000176204ENST00000409093Q86VH4
ENSG00000176204ENST00000409282Q4KMX1
ENSG00000176204ENST00000409884Q86VH4
ENSG00000176204ENST00000409911B8ZZ84
ENSG00000176204ENST00000456154C9JM64

Expression (GTEx)

0
1
2
3
4
5
6
7
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Neuronal SystemREACTOMER-HSA-112316
Protein-protein interactions at synapsesREACTOMER-HSA-6794362
Interactions of neurexins and neuroligins at synapsesREACTOMER-HSA-6794361

References

Pubmed IDYearTitleCitations
350524062021LRRTM4 Terminal Exon Duplicated in Family with Tourette Syndrome, Autism and ADHD.4
350524062021LRRTM4 Terminal Exon Duplicated in Family with Tourette Syndrome, Autism and ADHD.4
318545162020Targeted sequencing of the LRRTM gene family in suicide attempters with bipolar disorder.4
318545162020Targeted sequencing of the LRRTM gene family in suicide attempters with bipolar disorder.4
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78

Citation

Dessen P

LRRTM4 (leucine rich repeat transmembrane neuronal 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/68674