SLC25A17 (solute carrier family 25 member 17)

2014-11-01  

Identity

HGNC
SLC25A17
LOCATION
22q13.2
LOCUSID
10478
ALIAS
PMP34
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10478
MIM: 606795
HGNC: 10987
Ensembl: ENSG00000100372

Variants:

dbSNP: 10478
ClinVar: 10478
TCGA: ENSG00000100372
COSMIC: SLC25A17

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100372ENST00000263255F8WA85
ENSG00000100372ENST00000402844B0QYW5
ENSG00000100372ENST00000412879F8WCH6
ENSG00000100372ENST00000420970F8WE74
ENSG00000100372ENST00000426396F8WEC6
ENSG00000100372ENST00000427084F8WCN9
ENSG00000100372ENST00000430221F8WF87
ENSG00000100372ENST00000434185B1AHN4
ENSG00000100372ENST00000434193F2Z2I9
ENSG00000100372ENST00000435456O43808
ENSG00000100372ENST00000443810F2Z2I9
ENSG00000100372ENST00000447566F8WBA4
ENSG00000100372ENST00000449676F2Z2I9
ENSG00000100372ENST00000458600F2Z2I9
ENSG00000100372ENST00000544408F6RTR7

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
PeroxisomeKEGGko04146
PeroxisomeKEGGhsa04146
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Peroxisomal lipid metabolismREACTOMER-HSA-390918
Alpha-oxidation of phytanateREACTOMER-HSA-389599

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
381598912024The solute carrier SLC25A17 sustains peroxisomal redox homeostasis in diverse mammalian cell lines.0
381598912024The solute carrier SLC25A17 sustains peroxisomal redox homeostasis in diverse mammalian cell lines.0
373863592023Multiomics data analyses to identify SLC25A17 as a novel biomarker to predict the prognosis and immune microenvironment in head and neck squamous cell carcinoma.1
373863592023Multiomics data analyses to identify SLC25A17 as a novel biomarker to predict the prognosis and immune microenvironment in head and neck squamous cell carcinoma.1
250024032014PEX16 contributes to peroxisome maintenance by constantly trafficking PEX3 via the ER.23
250024032014PEX16 contributes to peroxisome maintenance by constantly trafficking PEX3 via the ER.23
232661872013The mitochondrial transporter family SLC25: identification, properties and physiopathology.0
232661872013The mitochondrial transporter family SLC25: identification, properties and physiopathology.0
221855732012The human gene SLC25A17 encodes a peroxisomal transporter of coenzyme A, FAD and NAD+.54
221855732012The human gene SLC25A17 encodes a peroxisomal transporter of coenzyme A, FAD and NAD+.54
124458292002Identification of human PMP34 as a peroxisomal ATP transporter.30
124458292002Identification of human PMP34 as a peroxisomal ATP transporter.30

Citation

Dessen P

SLC25A17 (solute carrier family 25 member 17)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73340/css/js/js/lib/jquery-3.5.1.min.js