SLC38A6 (solute carrier family 38 member 6)

2014-11-01  

Identity

HGNC
SLC38A6
LOCATION
14q23.1
LOCUSID
145389
ALIAS
NAT-1,SNAT6
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 145389
MIM: 616518
HGNC: 19863
Ensembl: ENSG00000139974

Variants:

dbSNP: 145389
ClinVar: 145389
TCGA: ENSG00000139974
COSMIC: SLC38A6

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000139974ENST00000267488Q8IZM9
ENSG00000139974ENST00000354886Q8IZM9
ENSG00000139974ENST00000451406A0A0C4DG39
ENSG00000139974ENST00000491344E9PMA3
ENSG00000139974ENST00000524402H0YJG2
ENSG00000139974ENST00000525723E9PM79
ENSG00000139974ENST00000526105G3V3H5
ENSG00000139974ENST00000526539H0YJ85
ENSG00000139974ENST00000527591H0YE10
ENSG00000139974ENST00000528350H0YJU1
ENSG00000139974ENST00000529212H0YF42
ENSG00000139974ENST00000529345H0YEH3
ENSG00000139974ENST00000533744H0YDY0
ENSG00000139974ENST00000534758A0A087WZP5

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
366750232023New Transcriptomic Biomarkers of 5-Fluorouracil Resistance.3
366750232023New Transcriptomic Biomarkers of 5-Fluorouracil Resistance.3
359015072022SLC38A6, regulated by EP300-mediated modifications of H3K27ac, promotes cell proliferation, glutamine metabolism and mitochondrial respiration in hepatocellular carcinoma.4
359015072022SLC38A6, regulated by EP300-mediated modifications of H3K27ac, promotes cell proliferation, glutamine metabolism and mitochondrial respiration in hepatocellular carcinoma.4
247523312014Histological analysis of SLC38A6 (SNAT6) expression in mouse brain shows selective expression in excitatory neurons with high expression in the synapses.16
247523312014Histological analysis of SLC38A6 (SNAT6) expression in mouse brain shows selective expression in excitatory neurons with high expression in the synapses.16

Citation

Dessen P

SLC38A6 (solute carrier family 38 member 6)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73426/cancer-prone-explorer/gene-fusions-explorer/deep-insight-explorer/