SYCP2L (synaptonemal complex protein 2 like)

2014-11-01 Affiliation

Identity

HGNC

SYCP2L

LOCATION

6p24.2

LOCUSID

221711

ALIAS

C6orf177,NO145,dJ62D2.1

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 221711
MIM: 616799
HGNC: 21537
Ensembl: ENSG00000153157

Variants:

dbSNP: 221711
ClinVar: 221711
TCGA: ENSG00000153157
COSMIC: SYCP2L

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000153157	ENST00000283141	Q5T4T6
ENSG00000153157	ENST00000341041	Q5T4T6
ENSG00000153157	ENST00000487561	H7C4Q1
ENSG00000153157	ENST00000543878	K7N7B3

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
37417852	2023	Involvement of SYCP2L and TDRD3 gene variants on ovarian reserve and reproductive outcomes: a cross-sectional study.	0
37417852	2023	Involvement of SYCP2L and TDRD3 gene variants on ovarian reserve and reproductive outcomes: a cross-sectional study.	0
32303603	2021	Homozygous variants in SYCP2L cause premature ovarian insufficiency.	10
32303603	2021	Homozygous variants in SYCP2L cause premature ovarian insufficiency.	10
26362258	2015	Accelerated reproductive aging in females lacking a novel centromere protein SYCP2L.	14
26362258	2015	Accelerated reproductive aging in females lacking a novel centromere protein SYCP2L.	14
19448621	2009	Genome-wide association studies identify loci associated with age at menarche and age at natural menopause.	180
19448621	2009	Genome-wide association studies identify loci associated with age at menarche and age at natural menopause.	180

Citation

Dessen P

SYCP2L (synaptonemal complex protein 2 like)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74402