TSIX (TSIX transcript, XIST antisense RNA)

2014-11-01  

Identity

HGNC
TSIX
LOCATION
Xq13.2
LOCUSID
9383
ALIAS
LINC00013,NCRNA00013,XIST-AS,XIST-AS1,XISTAS
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 9383
MIM: 300181
HGNC: 12377
Ensembl: ENSG00000270641

Variants:

dbSNP: 9383
ClinVar: 9383
TCGA: ENSG00000270641
COSMIC: TSIX

RNA/Proteins

Expression (GTEx)

0
1
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
325350702020Dysregulation in the expression of (lncRNA-TSIX, TP53INP2 mRNA, miRNA-1283) in spinal cord injury.5
325350702020Dysregulation in the expression of (lncRNA-TSIX, TP53INP2 mRNA, miRNA-1283) in spinal cord injury.5
310043022019Potential role of lncRNA-TSIX, miR-548-a-3p, and SOGA1 mRNA in the diagnosis of hepatocellular carcinoma.14
310043022019Potential role of lncRNA-TSIX, miR-548-a-3p, and SOGA1 mRNA in the diagnosis of hepatocellular carcinoma.14
265667002016Long non-coding RNA TSIX is upregulated in scleroderma dermal fibroblasts and controls collagen mRNA stabilization.27
265667002016Long non-coding RNA TSIX is upregulated in scleroderma dermal fibroblasts and controls collagen mRNA stabilization.27
259810392015A Primary Role for the Tsix lncRNA in Maintaining Random X-Chromosome Inactivation.53
259810392015A Primary Role for the Tsix lncRNA in Maintaining Random X-Chromosome Inactivation.53
117431582002CTCF, a candidate trans-acting factor for X-inactivation choice.103
117431582002CTCF, a candidate trans-acting factor for X-inactivation choice.103
115557942001Identification of TSIX, encoding an RNA antisense to human XIST, reveals differences from its murine counterpart: implications for X inactivation.38
115557942001Identification of TSIX, encoding an RNA antisense to human XIST, reveals differences from its murine counterpart: implications for X inactivation.38

Citation

Dessen P

TSIX (TSIX transcript, XIST antisense RNA)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75227