XKR4 (XK related 4)

2014-11-01  

Identity

HGNC
XKR4
LOCATION
8q12.1
LOCUSID
114786
ALIAS
XRG4
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 114786
HGNC: 29394
Ensembl: ENSG00000206579

Variants:

dbSNP: 114786
ClinVar: 114786
TCGA: ENSG00000206579
COSMIC: XKR4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000206579ENST00000327381Q5GH76
ENSG00000206579ENST00000622811Q5GH76

Expression (GTEx)

0
1
2
3
4
5
6
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
337254862021Caspase cleavage releases a nuclear protein fragment that stimulates phospholipid scrambling at the plasma membrane.8
337254862021Caspase cleavage releases a nuclear protein fragment that stimulates phospholipid scrambling at the plasma membrane.8
248523702014Genome-wide association study identifies a novel susceptibility gene for serum TSH levels in Chinese populations.16
248523702014Genome-wide association study identifies a novel susceptibility gene for serum TSH levels in Chinese populations.16
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
206077902010Analysis of GWAS top hits in ADHD suggests association to two polymorphisms located in genes expressed in the cerebellum.18
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
206077902010Analysis of GWAS top hits in ADHD suggests association to two polymorphisms located in genes expressed in the cerebellum.18
185210902009Association of the NPAS3 gene and five other loci with response to the antipsychotic iloperidone identified in a whole genome association study.50
195734792009Applicability of a genetic signature for enhanced iloperidone efficacy in the treatment of schizophrenia.12
185210902009Association of the NPAS3 gene and five other loci with response to the antipsychotic iloperidone identified in a whole genome association study.50
195734792009Applicability of a genetic signature for enhanced iloperidone efficacy in the treatment of schizophrenia.12

Citation

Dessen P

XKR4 (XK related 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75782