TRBV16 (T cell receptor beta variable 16)

2017-09-01 Affiliation

Identity

HGNC

TRBV16

LOCATION

7q34

LOCUSID

28571

ALIAS

BV25S1J1.2,TCRB,TCRBV16S1,TCRBV25S1,TCRBV25S1A2PT

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 28571
HGNC: 12191
Ensembl: ENSG00000275243
IMGT/GENE-DB:

Variants:

dbSNP: 28571
ClinVar: 28571
TCGA: ENSG00000275243
COSMIC: TRBV16

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000275243	ENST00000620773	A0A087WV62

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
14730616	2004	Genomic absence of the gene encoding T cell receptor Vbeta7.2 is linked to the presence of autoantibodies in Sjögren's syndrome.	1
15086347	2004	T-cell receptor BV gene segment polymorphisms in healthy elderly individuals from the south of Brazil.	0
14730616	2004	Genomic absence of the gene encoding T cell receptor Vbeta7.2 is linked to the presence of autoantibodies in Sjögren's syndrome.	1
15086347	2004	T-cell receptor BV gene segment polymorphisms in healthy elderly individuals from the south of Brazil.	0

Citation

Dessen P

TRBV16 (T cell receptor beta variable 16)

Atlas Genet Cytogenet Oncol Haematol. 2017-09-01

Online version: http://atlasgeneticsoncology.org/gene/79217