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ESR2 (Estrogen Receptor 2 (ER beta) )

Identity

Other namesESRB
ESR-BETA
ESTRB
ER-BETA
Erb
NR3A2
HGNC ESR2
Location 14q23.2
Location_base_pair Starts at 63763504 and ends at 63830881 bp from pter ( according to hg18-Mar_2006).

DNA/RNA

 
  Genomic organization of human ER beta gene, protein and functional domains.
Gene: exons are indicated with boxes and introns with lines. The numbers above each box indicate the size of the exons (bp); the numbers below each line designate the size of the respective introns (bp). Dotted lines between gene and protein point to protein domain junctions.
Protein: numbers indicate the total size of the protein in amino acids. The shaded bar shows the divergent C-terminal regions between the isoforms.
Description ER beta gene consists of 8 encoding exons. The open reading frame of the coding region is 1,593 bp.

Protein

Description The full-length human ER beta protein is 530 amino acids; 59.2 KDa, is also named ER beta1. Another isoform, ER beta2, is formed by alternative splicing of the mRNA. ER beta2 encodes a protein of 495 amino acid residues, with a molecular weight of 55.5 kDa. ER beta2 has a unique C-terminus, where the amino acids corresponding to exon 8 are replaced with 26 unique amino acids.
Expression ER beta is mainly expressed in tissues such as the ovary (granulosa cells), prostate (epithelium), testis, epididymis, colon, lung, bladder, bone marrow, salivary gland, vascular endothelium and regions of the brain, including hypothalamus and cortex.
Localisation Nucleus
Function Cellular signaling of estrogen is mediated through two estrogen receptors (ERs), ER alpha and ER beta. The first ER, now known as ER alpha, was cloned in 1986. This receptor was regarded as the only ER that mediates estrogenic effects, until a second ER, now known as ER beta, was cloned from rat prostate. ER alpha and ER beta belong to the superfamily of nuclear receptors and specifically to the family of steroid receptors that act as ligand-regulated transcription factors. ER alpha and ER beta have a high sequence homology and share affinity for the same ligands and DNA response elements.
Binding of ligand activates ERs, by a mechanism that involves dissociation of heat shock proteins and dimerization of receptor proteins. Estrogen-modulated gene transcription is exerted via different mechanisms: the genomic and the nongenomic pathways. The canonical model for ER-mediated regulation of gene expression involves the direct binding of dimeric ER to DNA sequences known as estrogen response elements (EREs), followed by recruitment of a variety of coregulators to alter chromatin structure and facilitate recruitment of the RNA polymerase II (Pol II) transcriptional machinery.
The transcriptional activity of ERs can be modulated by different types of post-translational modifications such as phosphorylation, acetylation, sumoylation, ubiquitination and methylation.
ER alpha and ER beta exhibit different affinities for some natural compounds, and distinct expression patterns in a variety of tissues. Transcriptional activation by ER alpha is mediated by two distinct activation functions: the constitutively active AF-1 and the ligand-dependent AF-2. ER beta seems to have a weaker corresponding AF-1 function and thus depends more on the AF-2 for its transcriptional activation function. ER alpha and ER beta have different activities in certain ligand, cell-type, and promoter contexts.
Homology Chimpanzee (Pan troglodytes), dog (Canis lupus familiaris), cow (Bos taurus), mouse (Mus musculus), rat (Rattus norvegicus) chicken (Gallus gallus), zebrafish (Danio rerio).

Implicated in

Entity Various cancers
Note Targeted disruption of ER beta in mice has suggested roles for ER beta in many tissues and organs, including the ovary, uterus, mammary gland, brain, immune system and ventral prostate.
  
Entity Prostate cancer
Disease Estrogens can have profound effects on prostate growth and differentiation as well as in the pathogenesis of prostate cancer. In the adult rodent ventral prostate, ER beta is expressed in the epithelial cells, whereas ER alpha is expressed in the stroma. The estrogenic effects in the prostate may therefore be exerted by both ERs but in different cells. ER beta knockout mice display signs of prostatic hyperplasia with aging.
  
Entity Breast cancer
Disease Estrogen is essential for growth and development of the mammary glands, and has been associated with promotion and growth of breast cancer. ER beta is found in both ductal and lobular epithelial and stromal cells of the rodent, whereas ER alpha is only found in the ductal and lobular epithelial cells and not in stroma. Recent studies have indicated a protective role of ER beta against breast cancer development. In vitro studies indicated that ER beta is an important modulator of proliferation and invasion of breast cancer cells.
  
Entity Colon cancer
Disease ER beta is the predominant ER in the colonic epithelium, suggesting that effects of estrogen in the colon are mediated by ER beta. In colons from ER beta knockout mice, the number of proliferating cells was higher, and the migration of labelled cells from base to lumen of the crypts was faster when compared to wild-type mice. Additionally, immunohistochemical staining revealed fewer apoptotic cells (cleaved caspase 3-positive), a significant decrease in expression of the epithelial differentiation marker, cytokeratin CK20, the adherens junction protein, alpha -catenin, and the hemidesmosomal protein, plectin, in ER beta knockout mice. These findings suggest a role for ER beta in the organization and architectural maintenance of the colon.
  
Entity Ovarian cancer
Disease A loss of ER beta expression or a decrease in ER beta/ER alpha ratio in epithelial ovarian cancer cells as compared with normal tissues has been reported by several groups. ER beta overexpression in ovarian cancer cells has been reported to exert antitumoral effects.
  

External links

Nomenclature
HGNCESR2   3468
Entrez_GeneESR2  2100  estrogen receptor 2 (ER beta)
Cards
AtlasESR2ID40500ch14q23
GeneCardsESR2
EnsemblESR2 [Search_View]   ENSG00000140009 [Gene_View]  ESR2 [Vega]
GenatlasESR2
GeneLynxESR2
eGenomeESR2
euGene2100
Genomic and cartography
GoldenPathESR2  -  14q23.2   chr14:63763504-63830881 -  14q23.2   [Description]    (hg18-Mar_2006)
EnsemblESR2 - 14q23.2 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneESR2
Gene and transcription
GenbankAB006589 [ ENTREZ ]
GenbankAB006590 [ ENTREZ ]
GenbankAB209620 [ ENTREZ ]
GenbankAF047463 [ ENTREZ ]
GenbankAF051427 [ ENTREZ ]
RefSeqNM_001040275 [ SRS ]    NM_001040275 [ ENTREZ ]
RefSeqNM_001040276 [ SRS ]    NM_001040276 [ ENTREZ ]
RefSeqNM_001437 [ SRS ]    NM_001437 [ ENTREZ ]
RefSeqAC_000057 [ SRS ]    AC_000057 [ ENTREZ ]
RefSeqAC_000146 [ SRS ]    AC_000146 [ ENTREZ ]
RefSeqNC_000014 [ SRS ]    NC_000014 [ ENTREZ ]
RefSeqNT_026437 [ SRS ]    NT_026437 [ ENTREZ ]
RefSeqNW_001838111 [ SRS ]    NW_001838111 [ ENTREZ ]
RefSeqNW_925561 [ SRS ]    NW_925561 [ ENTREZ ]
CCDSESR2 CCDS - NCBI
AceViewESR2 AceView - NCBI
UnigeneHs.660607 [ SRS ]    Hs.660607 [ NCBI ]     HS660607 [ spliceNest ]
Fast-db1776 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ0MWT5 [ SRS]    Q0MWT5 [ EXPASY ]     Q0MWT5 [ INTERPRO ]     Q0MWT5 [ UNIPROT ] Q0MWT5 [ VarSplice ]
PrositePS00031 NUCLEAR_REC_DBD_1 [ SRS ]    PS00031 NUCLEAR_REC_DBD_1 [ Expasy ]
PrositePS51030 NUCLEAR_REC_DBD_2 [ SRS ]    PS51030 NUCLEAR_REC_DBD_2 [ Expasy ]
InterproIPR008946 Nucl_hormone_rcpt_ligand-bd [ SRS ]    IPR008946 Nucl_hormone_rcpt_ligand-bd [ EBI ]
InterproIPR000536 Nucl_hrmn_rcpt_lig-bd_core [ SRS ]    IPR000536 Nucl_hrmn_rcpt_lig-bd_core [ EBI ]
InterproIPR001723 Str_hrmn_rcpt [ SRS ]    IPR001723 Str_hrmn_rcpt [ EBI ]
InterproIPR000324 VitD_rcpt [ SRS ]    IPR000324 VitD_rcpt [ EBI ]
InterproIPR001628 Znf_hrmn_rcpt [ SRS ]    IPR001628 Znf_hrmn_rcpt [ EBI ]
InterproIPR013088 Znf_NHR/GATA [ SRS ]    IPR013088 Znf_NHR/GATA [ EBI ]
CluSTrQ0MWT5
PfamPF00104 Hormone_recep [ SRS ]    PF00104 Hormone_recep [ Sanger ]    pfam00104 [ NCBI-CDD ]
PfamPF00105 zf-C4 [ SRS ]    PF00105 zf-C4 [ Sanger ]    pfam00105 [ NCBI-CDD ]
SmartSM00430 HOLI [EMBL]
SmartSM00399 ZnF_C4 [EMBL]
ProdomPD000035 Znf_C4steroid[INRA-Toulouse]
ProdomQ0MWT5 Q0MWT5_HUMAN [ Domain structure ]   Q0MWT5 Q0MWT5_HUMAN  [ sequences sharing at least 1 domain ]
BlocksQ0MWT5
HPRD03390
Protein Interaction databases
DIPQ0MWT5
IntActQ0MWT5
Polymorphism : SNP, mutations, diseases
OMIM601663    [ map ]   
GENECLINICS601663
SNPESR2 [dbSNP-NCBI]  
SNPNM_001040275 [SNP-NCI]  
SNPNM_001040276 [SNP-NCI]  
SNPNM_001437 [SNP-NCI]  
SNPESR2 [GeneSNPs - Utah]  ESR2] [HGBASE - SRS]
HAPMAPESR2 [HAPMAP]  
COSMICESR2 [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDESR2
Genetic AssociationESR2
CDC HuGEESR2
General knowledge
Family BrowserESR2 [UCSC Family Browser]
SOURCENM_001040275
SOURCENM_001040276
SOURCENM_001437
SMDHs.660607
SAGEHs.660607
GOtranscription factor activity [Amigo]  transcription factor activity
GOtranscription coactivator activity [Amigo]  transcription coactivator activity
GOsteroid binding [Amigo]  steroid binding
GOprotein binding [Amigo]  protein binding
GOnucleus [Amigo]  nucleus
GOmitochondrion [Amigo]  mitochondrion
GOtranscription [Amigo]  transcription
GOregulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GOsignal transduction [Amigo]  signal transduction
GOcell-cell signaling [Amigo]  cell-cell signaling
GOzinc ion binding [Amigo]  zinc ion binding
GOestrogen receptor activity [Amigo]  estrogen receptor activity
GOnegative regulation of cell growth [Amigo]  negative regulation of cell growth
GOestrogen receptor signaling pathway [Amigo]  estrogen receptor signaling pathway
GOsequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GOmetal ion binding [Amigo]  metal ion binding
GOreceptor antagonist activity [Amigo]  receptor antagonist activity
PubGeneESR2
TreeFamESR2
CTD2100 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeESR2 Related clones (RZPD - Berlin)
PubMed
PubMed389 Pubmed reference(s) in Entrez

Bibliography

Cloning of a novel receptor expressed in rat prostate and ovary.
Kuiper GG, Enmark E, Pelto-Huikko M, Nilsson S, Gustafsson JA.
Proc Natl Acad Sci U S A. 1996 Jun 11;93(12):5925-30.
PMID 8650195
 
Molecular cloning and characterization of human estrogen receptor betacx: a potential inhibitor ofestrogen action in human.
Ogawa S, Inoue S, Watanabe T, Orimo A, Hosoi T, Ouchi Y, Muramatsu M.
Nucleic Acids Res. 1998 Aug 1;26(15):3505-12.
PMID 9671811
 
Mechanisms of estrogen action.
Nilsson S, Mäkelä S, Treuter E, Tujague M, Thomsen J, Andersson G, Enmark E, Pettersson K, Warner M, Gustafsson JA.
Physiol Rev. 2001 Oct;81(4):1535-65. (REVIEW)
PMID 11581496
 
International Union of Pharmacology. LXIV. Estrogen receptors.
Dahlman-Wright K, Cavailles V, Fuqua SA, Jordan VC, Katzenellenbogen JA, Korach KS, Maggi A, Muramatsu M, Parker MG, Gustafsson JA.
Pharmacol Rev. 2006 Dec;58(4):773-81. (REVIEW
PMID 17132854
 
Estrogen receptor-beta: recent lessons from in vivo studies.
Harris HA.
Mol Endocrinol. 2007 Jan;21(1):1-13. (REVIEW)
PMID 16556737
 
Estrogen receptor beta: an overview and update.
Zhao C, Dahlman-Wright K, Gustafsson JA.
Nucl Recept Signal. 2008 Feb 1;6:e003. (REVIEW)
PMID 18301783
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written04-2008Chunyan Zhao, Karin Dahlman-Wright, Jan-Ake Gustafsson
Department of Biosciences and Nutrition, Novum, Karolinska Institutet, S-141 57 Huddinge, Sweden

Citation

This paper should be referenced as such :
Zhao C, Dahlman-Wright K, Gustafsson JA . ESR2 (Estrogen Receptor 2 (ER beta) ). Atlas Genet Cytogenet Oncol Haematol. April 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/ESR2ID40500ch14q23.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sun Nov 9 19:40:21 2008


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