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AP1M2 (adaptor-related protein complex 1, mu 2 subunit)

Identity

Other namesAP1-mu2
HSMU1B
MU-1B
MU1B
mu2
HGNC (Hugo) AP1M2
LocusID (NCBI) 10053
Location 19p13.2
Location_base_pair Starts at 10683347 and ends at 10697991 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)AP1M2   558
Entrez_Gene (NCBI)AP1M2  10053  adaptor-related protein complex 1, mu 2 subunit
Cards
GeneCards (Weizmann)AP1M2
Ensembl (Hinxton)ENSG00000129354 [Gene_View]  chr19:10683347-10697991 [Contig_View]  AP1M2 [Vega]
AceView (NCBI)AP1M2
Genatlas (Paris)AP1M2
SOURCE (Stanford)NM_005498
Genomic and cartography
GoldenPath (UCSC)AP1M2  -  19p13.2   chr19:10683347-10697991 -  19p13.2   [Description]    (hg19-Feb_2009)
EnsemblAP1M2 - 19p13.2 [CytoView]
Mapping of homologs : NCBIAP1M2 [Mapview]
OMIM607309   
Gene and transcription
Genbank (Entrez)AF020797 AK023863 AK222946 AK315689 BC003387
RefSeq transcript (SRS)NM_005498
RefSeq transcript (Entrez)NM_005498
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NT_011295 NW_001838483 NW_004078098
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011295 NW_001838483 NW_004078098
Consensus coding sequences : CCDS (NCBI)AP1M2
Cluster EST : UnigeneHs.18894 [ SRS ] Hs.18894 [ NCBI ]
CGAP (NCI)Hs.18894
Alternative Splicing : Fast-db (Paris)GSHG0015502
Alternative Splicing GalleryENSG00000129354
Gene ExpressionAP1M2 [ NCBI-GEO ]   AP1M2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y6Q5 (SRS) Q9Y6Q5 (Uniprot)
NextProtQ9Y6Q5
With graphics : InterProQ9Y6Q5
Splice isoforms : SwissVarQ9Y6Q5(Swissvar)
Domaine pattern : Prosite (SRS)CLAT_ADAPTOR_M_1 (PS00990)    CLAT_ADAPTOR_M_2 (PS00991)    MHD (PS51072)   
Domaine pattern : Prosite (Expaxy)CLAT_ADAPTOR_M_1 (PS00990)    CLAT_ADAPTOR_M_2 (PS00991)    MHD (PS51072)   
Domains : Interpro (SRS)AP_mu_sigma_su    Clathrin_mu    Clathrin_mu_C    Clathrin_mu_CS    Longin-like_dom   
Domains : Interpro (EBI)AP_mu_sigma_su    Clathrin_mu    Clathrin_mu_C    Clathrin_mu_CS    Longin-like_dom   
Related proteins : CluSTrQ9Y6Q5
Domain families : Pfam (SRS)Adap_comp_sub (PF00928)    Clat_adaptor_s (PF01217)   
Domain families : Pfam (Sanger)Adap_comp_sub (PF00928)    Clat_adaptor_s (PF01217)   
Domain families : Pfam (NCBI)pfam00928    pfam01217   
DMDM10053
Blocks (Seattle)Q9Y6Q5
Human Protein AtlasENSG00000129354
HPRD06296
IPIIPI00002552   IPI00219794   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y6Q5
IntAct (EBI)Q9Y6Q5
FunCoupENSG00000129354
REACTOMEAP1M2
Protein Interaction Database10053
BioGRIDAP1M2
InParanoidQ9Y6Q5
Interologous Interaction database Q9Y6Q5
IntegromeDBAP1M2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)AP1M2
SNP (GeneSNP Utah)AP1M2
SNP : HGBaseAP1M2
Genetic variants : HAPMAPAP1M2
Somatic Mutations in Cancer : COSMICAP1M2 
CONAN: Copy Number AnalysisAP1M2 
Mutations and Diseases : HGMDAP1M2
OMIM607309   
GENETests607309   
Disease Genetic AssociationAP1M2
Huge Navigator AP1M2 [HugePedia]  AP1M2 [HugeCancerGEM]
Genomic VariantsAP1M2  AP1M2 [DGVbeta]
snp3D : Map Gene to Disease10053
General knowledge
Homologs : HomoloGeneAP1M2
Homology/Alignments : Family Browser (UCSC)AP1M2
Phylogenetic Trees/Animal Genes : TreeFamAP1M2
Chemical/Protein Interactions : CTD10053
Chemical/Pharm GKB GenePA24849
Clinical trialAP1M2
Cancer Resource (Charite)ENSG00000129354
Ontology : AmiGOGolgi membrane  lysosomal membrane  cytosol  protein targeting  post-Golgi vesicle-mediated transport  vesicle targeting  viral reproduction  cellular membrane organization  antigen processing and presentation of exogenous peptide antigen via MHC class II  clathrin adaptor complex  cytoplasmic vesicle membrane  clathrin-coated vesicle membrane  trans-Golgi network membrane  regulation of defense response to virus by virus  
Ontology : EGO-EBIGolgi membrane  lysosomal membrane  cytosol  protein targeting  post-Golgi vesicle-mediated transport  vesicle targeting  viral reproduction  cellular membrane organization  antigen processing and presentation of exogenous peptide antigen via MHC class II  clathrin adaptor complex  cytoplasmic vesicle membrane  clathrin-coated vesicle membrane  trans-Golgi network membrane  regulation of defense response to virus by virus  
Other databases
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
PubGeneAP1M2
iHOPAP1M2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:36:36 CEST 2013
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