Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ATRIP (ATR interacting protein)

Identity

Alias (NCBI)-
HGNC (Hugo) ATRIP
HGNC Alias symbFLJ12343
MGC20625
MGC21482
MGC26740
LocusID (NCBI) 84126
Atlas_Id 50207
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 48446737 and ends at 48467645 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ATRIP   33499
Cards
Entrez_Gene (NCBI)ATRIP    ATR interacting protein
Aliases
GeneCards (Weizmann)ATRIP
Ensembl hg19 (Hinxton)ENSG00000164053 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164053 [Gene_View]  ENSG00000164053 [Sequence]  chr3:48446737-48467645 [Contig_View]  ATRIP [Vega]
ICGC DataPortalENSG00000164053
TCGA cBioPortalATRIP
AceView (NCBI)ATRIP
Genatlas (Paris)ATRIP
SOURCE (Princeton)ATRIP
Genetics Home Reference (NIH)ATRIP
Genomic and cartography
GoldenPath hg38 (UCSC)ATRIP  -     chr3:48446737-48467645 +  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATRIP  -     3p21.31   [Description]    (hg19-Feb_2009)
GoldenPathATRIP - 3p21.31 [CytoView hg19]  ATRIP - 3p21.31 [CytoView hg38]
ImmunoBaseENSG00000164053
Genome Data Viewer NCBIATRIP [Mapview hg19]  
OMIM606605   
Gene and transcription
Genbank (Entrez)AF451323 AK022405 AK291568 AK291829 AK300548
RefSeq transcript (Entrez)NM_001271022 NM_001271023 NM_032166 NM_130384
Consensus coding sequences : CCDS (NCBI)ATRIP
Gene ExpressionATRIP [ NCBI-GEO ]   ATRIP [ EBI - ARRAY_EXPRESS ]   ATRIP [ SEEK ]   ATRIP [ MEM ]
Gene Expression Viewer (FireBrowse)ATRIP [ Firebrowse - Broad ]
GenevisibleExpression of ATRIP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84126
GTEX Portal (Tissue expression)ATRIP
Human Protein AtlasENSG00000164053-ATRIP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ATRIP
Human Protein Atlas [tissue]ENSG00000164053-ATRIP [tissue]
Protein Interaction databases
BioGRIDATRIP
STRING (EMBL)ATRIP
ZODIACATRIP
Ontologies - Pathways
Litterature
PubMed85 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXATRIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jan 17 15:15:50 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.