CA9 (carbonic anhydrase IX)

Identity

Other names	CAIX
	MN
HGNC	CA9
Location	9p12
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CA9   1383
Entrez_Gene	CA9  768  carbonic anhydrase IX
	Cards
GeneCards	CA9
Ensembl	CA9 [Search_View]   ENSG00000107159 [Gene_View]
Genatlas	CA9
GeneLynx	CA9
eGenome	CA9
euGene	768
	Genomic and cartography
GoldenPath	CA9  -  9p12   chr9:35663915-35671154 +  9p13.3   [Description]    (hg18-March_2006)
Ensembl	CA9 - 9p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CA9
	Gene and transcription
Genbank	AI023541 [ ENTREZ ]
Genbank	AJ010588 [ ENTREZ ]
Genbank	AL554705 [ ENTREZ ]
Genbank	BC014950 [ ENTREZ ]
Genbank	CR590646 [ ENTREZ ]
RefSeq	NM_001216 [ SRS ]    NM_001216 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839149 [ SRS ]    NW_001839149 [ ENTREZ ]
RefSeq	NW_924062 [ SRS ]    NW_924062 [ ENTREZ ]
AceView	CA9 AceView - NCBI
Unigene	Hs.709224 [ SRS ]    Hs.709224 [ NCBI ]     HS709224 [ spliceNest ]
Fast-db	6371 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q16790 [ SRS]    Q16790 [ EXPASY ]     Q16790 [ INTERPRO ]     Q16790 [ UNIPROT ]
Prosite	PS00162 ALPHA_CA_1 [ SRS ]    PS00162 ALPHA_CA_1 [ Expasy ]
Prosite	PS51144 ALPHA_CA_2 [ SRS ]    PS51144 ALPHA_CA_2 [ Expasy ]
Interpro	IPR001148 Euk_COanhd [ SRS ]    IPR001148 Euk_COanhd [ EBI ]
CluSTr	Q16790
Pfam	PF00194 Carb_anhydrase [ SRS ]    PF00194 Carb_anhydrase [ Sanger ]    pfam00194 [ NCBI-CDD ]
Prodom	PD000865 Euk_COanhd[INRA-Toulouse]
Prodom	Q16790 CAH9_HUMAN [ Domain structure ]   Q16790 CAH9_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q16790
PDB	2HKF [ SRS ]    2HKF [ PdbSum ],   2HKF [ IMB ]   2HKF [ RSDB ]
HPRD	04417
	Protein Interaction databases
DIP	Q16790
IntAct	Q16790
	Polymorphism : SNP, mutations, diseases
OMIM	603179    [ map ]
GENECLINICS	603179
SNP	CA9 [dbSNP-NCBI]
SNP	NM_001216 [SNP-NCI]
SNP	CA9 [GeneSNPs - Utah]  CA9] [HGBASE - SRS]
HAPMAP	CA9 [HAPMAP]
HGMD	CA9
	General knowledge
Family Browser	CA9 [UCSC Family Browser]
SOURCE	NM_001216
SMD	Hs.709224
SAGE	Hs.709224
Enzyme	4.2.1.1 [ Enzyme-Expasy ]   4.2.1.1 [ Enzyme-SRS ]   4.2.1.1 [ IntEnz-EBI ]   4.2.1.1 [ BRENDA ]   4.2.1.1 [ KEGG ]   4.2.1.1 [ WIT ]
GO	morphogenesis of an epithelium [Amigo]  morphogenesis of an epithelium
GO	carbonate dehydratase activity [Amigo]  carbonate dehydratase activity
GO	nucleus [Amigo]  nucleus
GO	plasma membrane [Amigo]  plasma membrane
GO	one-carbon compound metabolic process [Amigo]  one-carbon compound metabolic process
GO	zinc ion binding [Amigo]  zinc ion binding
GO	integral to membrane [Amigo]  integral to membrane
GO	lyase activity [Amigo]  lyase activity
GO	cell projection [Amigo]  cell projection
GO	metal ion binding [Amigo]  metal ion binding
GO	secretion [Amigo]  secretion
KEGG	Nitrogen metabolism
PubGene	CA9
TreeFam	CA9
CTD	768 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CA9 Related clones (RZPD - Berlin)
	PubMed
PubMed	72 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:02:54 2008