Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CNR1 (cannabinoid receptor 1)

Identity

Alias (NCBI)CANN6
CB-R
CB1
CB1A
CB1K5
CB1R
CNR
HGNC (Hugo) CNR1
HGNC Alias symbCB1K5
CB-R
CB1
CANN6
CB1A
HGNC Previous nameCNR
HGNC Previous namecannabinoid receptor 1 (brain)
LocusID (NCBI) 1268
Atlas_Id 45964
Location 6q15  [Link to chromosome band 6q15]
Location_base_pair Starts at 88139866 and ends at 88145337 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CNR1   2159
Cards
Entrez_Gene (NCBI)CNR1    cannabinoid receptor 1
AliasesCANN6; CB-R; CB1; CB1A; 
CB1K5; CB1R; CNR
GeneCards (Weizmann)CNR1
Ensembl hg19 (Hinxton)ENSG00000118432 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118432 [Gene_View]  ENSG00000118432 [Sequence]  chr6:88139866-88145337 [Contig_View]  CNR1 [Vega]
ICGC DataPortalENSG00000118432
TCGA cBioPortalCNR1
AceView (NCBI)CNR1
Genatlas (Paris)CNR1
SOURCE (Princeton)CNR1
Genetics Home Reference (NIH)CNR1
Genomic and cartography
GoldenPath hg38 (UCSC)CNR1  -     chr6:88139866-88145337 -  6q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CNR1  -     6q15   [Description]    (hg19-Feb_2009)
GoldenPathCNR1 - 6q15 [CytoView hg19]  CNR1 - 6q15 [CytoView hg38]
ImmunoBaseENSG00000118432
genome Data Viewer NCBICNR1 [Mapview hg19]  
OMIM114610   
Gene and transcription
Genbank (Entrez)AF107262 AK313908 AY766182 AY995204 BC074811
RefSeq transcript (Entrez)NM_001160226 NM_001160258 NM_001160259 NM_001160260 NM_001365869 NM_001365870 NM_001365872 NM_001365874 NM_001370545 NM_001370546 NM_001370547 NM_016083 NM_033181
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CNR1
Alternative Splicing GalleryENSG00000118432
Gene ExpressionCNR1 [ NCBI-GEO ]   CNR1 [ EBI - ARRAY_EXPRESS ]   CNR1 [ SEEK ]   CNR1 [ MEM ]
Gene Expression Viewer (FireBrowse)CNR1 [ Firebrowse - Broad ]
GenevisibleExpression of CNR1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1268
GTEX Portal (Tissue expression)CNR1
Human Protein AtlasENSG00000118432-CNR1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CNR1
Blocks (Seattle)CNR1
Human Protein Atlas [tissue]ENSG00000118432-CNR1 [tissue]
HPRD00259
IPIIPI00009396   IPI00215993   IPI00655874   IPI01018356   IPI00985031   
Protein Interaction databases
BioGRIDCNR1
STRING (EMBL)CNR1
ZODIACCNR1
Ontologies - Pathways
Litterature
PubMed466 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCNR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:16:17 CET 2021

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