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CSH1 (chorionic somatomammotropin hormone 1)

Identity

Alias_symbol (synonym)hCS-A
CSA
PL
CSMT
FLJ75407
Other aliasCS-1
GHB3
hCS-1
HGNC (Hugo) CSH1
LocusID (NCBI) 1442
Atlas_Id 50632
Location 17q23.3  [Link to chromosome band 17q23]
Location_base_pair Starts at 61972268 and ends at 61974021 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ACER2 (9p22.1) / CSH1 (17q23.3)CSH1 (17q23.3) / CALD1 (7q33)CSH1 (17q23.3) / FBXW2 (9q33.2)
CSH1 (17q23.3) / FCGR2A (1q23.3)CSH1 (17q23.3) / NFYA (6p21.1)CSH1 (17q23.3) / PAPPA (9q33.1)
CSH1 (17q23.3) / RRBP1 (20p12.1)CSH1 (17q23.3) / SVEP1 (9q31.3)FCHO2 (5q13.2) / CSH1 (17q23.3)
ISYNA1 (19p13.11) / CSH1 (17q23.3)PRRC2B (9q34.13) / CSH1 (17q23.3)SERPINB6 (6p25.2) / CSH1 (17q23.3)
SLC36A4 (11q21) / CSH1 (17q23.3)UBA52 (19p13.11) / CSH1 (17q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CSH1   2440
Cards
Entrez_Gene (NCBI)CSH1  1442  chorionic somatomammotropin hormone 1
AliasesCS-1; CSA; CSMT; GHB3; 
PL; hCS-1; hCS-A
GeneCards (Weizmann)CSH1
Ensembl hg19 (Hinxton)ENSG00000136488 [Gene_View]  chr17:61972268-61974021 [Contig_View]  CSH1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000136488 [Gene_View]  chr17:61972268-61974021 [Contig_View]  CSH1 [Vega]
ICGC DataPortalENSG00000136488
TCGA cBioPortalCSH1
AceView (NCBI)CSH1
Genatlas (Paris)CSH1
WikiGenes1442
SOURCE (Princeton)CSH1
Genetics Home Reference (NIH)CSH1
Genomic and cartography
GoldenPath hg19 (UCSC)CSH1  -     chr17:61972268-61974021 -  17q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CSH1  -     17q23.3   [Description]    (hg38-Dec_2013)
EnsemblCSH1 - 17q23.3 [CytoView hg19]  CSH1 - 17q23.3 [CytoView hg38]
Mapping of homologs : NCBICSH1 [Mapview hg19]  CSH1 [Mapview hg38]
OMIM150200   
Gene and transcription
Genbank (Entrez)AK291587 AU134786 BC002717 BC005921 BC020756
RefSeq transcript (Entrez)NM_001317 NM_022640 NM_022641
RefSeq genomic (Entrez)NC_000017 NG_028354 NT_010783
Consensus coding sequences : CCDS (NCBI)CSH1
Cluster EST : UnigeneHs.654390 [ NCBI ]
CGAP (NCI)Hs.654390
Alternative Splicing GalleryENSG00000136488
Gene ExpressionCSH1 [ NCBI-GEO ]   CSH1 [ EBI - ARRAY_EXPRESS ]   CSH1 [ SEEK ]   CSH1 [ MEM ]
Gene Expression Viewer (FireBrowse)CSH1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)1442
GTEX Portal (Tissue expression)CSH1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSH1
DMDM Disease mutations1442
Blocks (Seattle)CSH1
Human Protein AtlasENSG00000136488
HPRD08350
IPIIPI00000891   IPI00332583   IPI00374576   IPI00025785   IPI00374578   IPI00374579   
Protein Interaction databases
FunCoupENSG00000136488
BioGRIDCSH1
STRING (EMBL)CSH1
ZODIACCSH1
Ontologies - Pathways
Huge Navigator CSH1 [HugePedia]
snp3D : Map Gene to Disease1442
BioCentury BCIQCSH1
ClinGenCSH1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1442
Chemical/Pharm GKB GenePA26943
Clinical trialCSH1
Miscellaneous
canSAR (ICR)CSH1 (select the gene name)
Probes
Litterature
PubMed84 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSH1
EVEXCSH1
GoPubMedCSH1
iHOPCSH1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:01:53 CET 2017

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