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CYP3A43 (cytochrome P450 family 3 subfamily A member 43)

Identity

Alias_namescytochrome P450, subfamily IIIA, polypeptide 43
cytochrome P450, family 3, subfamily A, polypeptide 43
Other alias-
HGNC (Hugo) CYP3A43
LocusID (NCBI) 64816
Atlas_Id 43751
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 99828013 and ends at 99866106 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CYP3A43   17450
Cards
Entrez_Gene (NCBI)CYP3A43  64816  cytochrome P450 family 3 subfamily A member 43
Aliases
GeneCards (Weizmann)CYP3A43
Ensembl hg19 (Hinxton)ENSG00000021461 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000021461 [Gene_View]  chr7:99828013-99866106 [Contig_View]  CYP3A43 [Vega]
ICGC DataPortalENSG00000021461
TCGA cBioPortalCYP3A43
AceView (NCBI)CYP3A43
Genatlas (Paris)CYP3A43
WikiGenes64816
SOURCE (Princeton)CYP3A43
Genetics Home Reference (NIH)CYP3A43
Genomic and cartography
GoldenPath hg38 (UCSC)CYP3A43  -     chr7:99828013-99866106 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CYP3A43  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblCYP3A43 - 7q22.1 [CytoView hg19]  CYP3A43 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBICYP3A43 [Mapview hg19]  CYP3A43 [Mapview hg38]
OMIM606534   
Gene and transcription
Genbank (Entrez)AA417369 AF280108 AF280109 AF280110 AF280111
RefSeq transcript (Entrez)NM_001278921 NM_022820 NM_057095 NM_057096
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CYP3A43
Cluster EST : UnigeneHs.306220 [ NCBI ]
CGAP (NCI)Hs.306220
Alternative Splicing GalleryENSG00000021461
Gene ExpressionCYP3A43 [ NCBI-GEO ]   CYP3A43 [ EBI - ARRAY_EXPRESS ]   CYP3A43 [ SEEK ]   CYP3A43 [ MEM ]
Gene Expression Viewer (FireBrowse)CYP3A43 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64816
GTEX Portal (Tissue expression)CYP3A43
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HB55   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HB55  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HB55
Splice isoforms : SwissVarQ9HB55
PhosPhoSitePlusQ9HB55
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_CYP3A    Cyt_P450_E_grp-II   
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
Conserved Domain (NCBI)CYP3A43
DMDM Disease mutations64816
Blocks (Seattle)CYP3A43
SuperfamilyQ9HB55
Human Protein AtlasENSG00000021461
Peptide AtlasQ9HB55
HPRD05942
IPIIPI00072735   IPI00220495   IPI00220496   IPI00220497   IPI01010948   IPI00924473   IPI00927769   IPI00927492   IPI00644342   IPI00926552   
Protein Interaction databases
DIP (DOE-UCLA)Q9HB55
IntAct (EBI)Q9HB55
FunCoupENSG00000021461
BioGRIDCYP3A43
STRING (EMBL)CYP3A43
ZODIACCYP3A43
Ontologies - Pathways
QuickGOQ9HB55
Ontology : AmiGOmonooxygenase activity  monooxygenase activity  iron ion binding  endoplasmic reticulum membrane  heme binding  organelle membrane  oxidation-reduction process  aromatase activity  
Ontology : EGO-EBImonooxygenase activity  monooxygenase activity  iron ion binding  endoplasmic reticulum membrane  heme binding  organelle membrane  oxidation-reduction process  aromatase activity  
Pathways : KEGGChemical carcinogenesis   
NDEx NetworkCYP3A43
Atlas of Cancer Signalling NetworkCYP3A43
Wikipedia pathwaysCYP3A43
Orthology - Evolution
OrthoDB64816
GeneTree (enSembl)ENSG00000021461
Phylogenetic Trees/Animal Genes : TreeFamCYP3A43
HOVERGENQ9HB55
HOGENOMQ9HB55
Homologs : HomoloGeneCYP3A43
Homology/Alignments : Family Browser (UCSC)CYP3A43
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCYP3A43 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYP3A43
dbVarCYP3A43
ClinVarCYP3A43
1000_GenomesCYP3A43 
Exome Variant ServerCYP3A43
ExAC (Exome Aggregation Consortium)CYP3A43 (select the gene name)
Genetic variants : HAPMAP64816
Genomic Variants (DGV)CYP3A43 [DGVbeta]
DECIPHERCYP3A43 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCYP3A43 
Mutations
ICGC Data PortalCYP3A43 
TCGA Data PortalCYP3A43 
Broad Tumor PortalCYP3A43
OASIS PortalCYP3A43 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCYP3A43  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCYP3A43
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
BioMutasearch CYP3A43
DgiDB (Drug Gene Interaction Database)CYP3A43
DoCM (Curated mutations)CYP3A43 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CYP3A43 (select a term)
intoGenCYP3A43
Cancer3DCYP3A43(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606534   
Orphanet
MedgenCYP3A43
Genetic Testing Registry CYP3A43
NextProtQ9HB55 [Medical]
TSGene64816
GENETestsCYP3A43
Target ValidationCYP3A43
Huge Navigator CYP3A43 [HugePedia]
snp3D : Map Gene to Disease64816
BioCentury BCIQCYP3A43
ClinGenCYP3A43
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64816
Chemical/Pharm GKB GenePA427
Clinical trialCYP3A43
Miscellaneous
canSAR (ICR)CYP3A43 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYP3A43
EVEXCYP3A43
GoPubMedCYP3A43
iHOPCYP3A43
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:30:26 CEST 2017

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