Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CYP3A43 (cytochrome P450, family 3, subfamily A, polypeptide 43)

Identity

Other names-
HGNC (Hugo) CYP3A43
LocusID (NCBI) 64816
Location 7q22.1
Location_base_pair Starts at 99425636 and ends at 99464173 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CYP3A43   17450
Entrez_Gene (NCBI)CYP3A43  64816  cytochrome P450, family 3, subfamily A, polypeptide 43
Cards
GeneCards (Weizmann)CYP3A43
Ensembl (Hinxton)ENSG00000021461 [Gene_View]  chr7:99425636-99464173 [Contig_View]  CYP3A43 [Vega]
AceView (NCBI)CYP3A43
Genatlas (Paris)CYP3A43
SOURCE (Stanford)NM_022820 NM_057095 NM_057096
Genomic and cartography
GoldenPath (UCSC)CYP3A43  -  7q22.1   chr7:99425636-99464173 +  7q22.1   [Description]    (hg19-Feb_2009)
EnsemblCYP3A43 - 7q22.1 [CytoView]
Mapping of homologs : NCBICYP3A43 [Mapview]
OMIM606534   
Gene and transcription
Genbank (Entrez)AA417369 AF280108 AF280109 AF280110 AF280111
RefSeq transcript (SRS)NM_022820 NM_057095 NM_057096
RefSeq transcript (Entrez)NM_022820 NM_057095 NM_057096
RefSeq genomic (SRS)AC_000068 AC_000139 NC_000007 NC_018918 NG_007935 NT_007933 NT_079595 NW_001839065 NW_004078032
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NG_007935 NT_007933 NT_079595 NW_001839065 NW_004078032
Consensus coding sequences : CCDS (NCBI)CYP3A43
Cluster EST : UnigeneHs.728751 [ SRS ] Hs.728751 [ NCBI ]
CGAP (NCI)Hs.728751
Alternative Splicing : Fast-db (Paris)GSHG0027558
Alternative Splicing GalleryENSG00000021461
Gene ExpressionCYP3A43 [ NCBI-GEO ]   CYP3A43 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HB55 (SRS) Q9HB55 (Uniprot)
NextProtQ9HB55
With graphics : InterProQ9HB55
Splice isoforms : SwissVarQ9HB55(Swissvar)
Domaine pattern : Prosite (SRS)CYTOCHROME_P450 (PS00086)   
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (SRS)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_CYP3A    Cyt_P450_E_grp-II   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_CYP3A    Cyt_P450_E_grp-II   
Related proteins : CluSTrQ9HB55
Domain families : Pfam (SRS)p450 (PF00067)   
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
DMDM64816
Blocks (Seattle)Q9HB55
Human Protein AtlasENSG00000021461
HPRD05942
IPIIPI00072735   IPI00220495   IPI00220496   IPI00220497   IPI01010948   IPI00924473   IPI00927769   IPI00927492   IPI00644342   IPI00926552   
Protein Interaction databases
DIP (DOE-UCLA)Q9HB55
IntAct (EBI)Q9HB55
FunCoupENSG00000021461
REACTOMECYP3A43
Protein Interaction Database64816
BioGRIDCYP3A43
InParanoidQ9HB55
Interologous Interaction database Q9HB55
IntegromeDBCYP3A43
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CYP3A43
SNP (GeneSNP Utah)CYP3A43
SNP : HGBaseCYP3A43
Genetic variants : HAPMAPCYP3A43
Somatic Mutations in Cancer : COSMICCYP3A43 
CONAN: Copy Number AnalysisCYP3A43 
Mutations and Diseases : HGMDCYP3A43
OMIM606534   
GENETests606534   
Disease Genetic AssociationCYP3A43
Huge Navigator CYP3A43 [HugePedia]  CYP3A43 [HugeCancerGEM]
Genomic VariantsCYP3A43  CYP3A43 [DGVbeta]
snp3D : Map Gene to Disease64816
General knowledge
Homologs : HomoloGeneCYP3A43
Homology/Alignments : Family Browser (UCSC)CYP3A43
Phylogenetic Trees/Animal Genes : TreeFamCYP3A43
Chemical/Protein Interactions : CTD64816
Chemical/Pharm GKB GenePA427
Clinical trialCYP3A43
Cancer Resource (Charite)ENSG00000021461
Ontology : AmiGOmonooxygenase activity  iron ion binding  endoplasmic reticulum membrane  xenobiotic metabolic process  electron carrier activity  heme binding  small molecule metabolic process  aromatase activity  
Ontology : EGO-EBImonooxygenase activity  iron ion binding  endoplasmic reticulum membrane  xenobiotic metabolic process  electron carrier activity  heme binding  small molecule metabolic process  aromatase activity  
Pathways : KEGGMetabolism of xenobiotics by cytochrome P450gamma-Hexachlorocyclohexane degradationLinoleic acid metabolism
Other databases
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
PubGeneCYP3A43
iHOPCYP3A43
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:33:18 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.