EGR3 (early growth response 3)

Identity

Other names	MGC138484
	PILOT
HGNC	EGR3
Location	8p23-p21
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	EGR3   3240
Entrez_Gene	EGR3  1960  early growth response 3
	Cards
GeneCards	EGR3
Ensembl	EGR3 [Search_View]   ENSG00000179388 [Gene_View]
Genatlas	EGR3
GeneLynx	EGR3
eGenome	EGR3
euGene	1960
	Genomic and cartography
GoldenPath	EGR3  -     chr8:22601119-22606760 -  8p21.3   [Description]    (hg18-March_2006)
Ensembl	EGR3 - 8p21.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	EGR3
	Gene and transcription
Genbank	AK292464 [ ENTREZ ]
Genbank	AK313604 [ ENTREZ ]
Genbank	BC104765 [ ENTREZ ]
Genbank	BC112279 [ ENTREZ ]
Genbank	N66802 [ ENTREZ ]
RefSeq	NM_004430 [ SRS ]    NM_004430 [ ENTREZ ]
RefSeq	AC_000051 [ SRS ]    AC_000051 [ ENTREZ ]
RefSeq	AC_000140 [ SRS ]    AC_000140 [ ENTREZ ]
RefSeq	NC_000008 [ SRS ]    NC_000008 [ ENTREZ ]
RefSeq	NT_023666 [ SRS ]    NT_023666 [ ENTREZ ]
RefSeq	NW_001839127 [ SRS ]    NW_001839127 [ ENTREZ ]
RefSeq	NW_923907 [ SRS ]    NW_923907 [ ENTREZ ]
AceView	EGR3 AceView - NCBI
Unigene	Hs.534313 [ SRS ]    Hs.534313 [ NCBI ]     HS534313 [ spliceNest ]
Fast-db	2536 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q06889 [ SRS]    Q06889 [ EXPASY ]     Q06889 [ INTERPRO ]     Q06889 [ UNIPROT ]
Prosite	PS00028 ZINC_FINGER_C2H2_1 [ SRS ]    PS00028 ZINC_FINGER_C2H2_1 [ Expasy ]
Prosite	PS50157 ZINC_FINGER_C2H2_2 [ SRS ]    PS50157 ZINC_FINGER_C2H2_2 [ Expasy ]
Interpro	IPR007087 Znf_C2H2 [ SRS ]    IPR007087 Znf_C2H2 [ EBI ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
Interpro	IPR013087 Znf_C2H2/integrase_DNA-bd [ SRS ]    IPR013087 Znf_C2H2/integrase_DNA-bd [ EBI ]
CluSTr	Q06889
Pfam	PF00096 zf-C2H2 [ SRS ]    PF00096 zf-C2H2 [ Sanger ]    pfam00096 [ NCBI-CDD ]
Smart	SM00355 ZnF_C2H2 [EMBL]
Prodom	PD000003 Znf_C2H2[INRA-Toulouse]
Prodom	Q06889 EGR3_HUMAN [ Domain structure ]   Q06889 EGR3_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q06889
HPRD	03881
	Protein Interaction databases
DIP	Q06889
IntAct	Q06889
	Polymorphism : SNP, mutations, diseases
OMIM	602419    [ map ]
GENECLINICS	602419
SNP	EGR3 [dbSNP-NCBI]
SNP	NM_004430 [SNP-NCI]
SNP	EGR3 [GeneSNPs - Utah]  EGR3] [HGBASE - SRS]
HAPMAP	EGR3 [HAPMAP]
HGMD	EGR3
	General knowledge
Family Browser	EGR3 [UCSC Family Browser]
SOURCE	NM_004430
SMD	Hs.534313
SAGE	Hs.534313
GO	transcription factor activity [Amigo]  transcription factor activity
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	neuromuscular synaptic transmission [Amigo]  neuromuscular synaptic transmission
GO	peripheral nervous system development [Amigo]  peripheral nervous system development
GO	muscle development [Amigo]  muscle development
GO	circadian rhythm [Amigo]  circadian rhythm
GO	zinc ion binding [Amigo]  zinc ion binding
GO	metal ion binding [Amigo]  metal ion binding
BIOCARTA	Neuropeptides VIP and PACAP inhibit the apoptosis of activated T cells    [Genes]
PubGene	EGR3
TreeFam	EGR3
CTD	1960 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	EGR3 Related clones (RZPD - Berlin)
	PubMed
PubMed	12 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:09:14 2008