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FBXO8 (F-box protein 8)

Identity

Other namesFBS
FBX8
HGNC (Hugo) FBXO8
LocusID (NCBI) 26269
Location 4q34.1
Location_base_pair Starts at 175157810 and ends at 175205402 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FBXO8   13587
Entrez_Gene (NCBI)FBXO8  26269  F-box protein 8
Cards
GeneCards (Weizmann)FBXO8
Ensembl (Hinxton)ENSG00000164117 [Gene_View]  chr4:175157810-175205402 [Contig_View]  FBXO8 [Vega]
AceView (NCBI)FBXO8
Genatlas (Paris)FBXO8
SOURCE (Stanford)NM_012180
Genomic and cartography
GoldenPath (UCSC)FBXO8  -  4q34.1   chr4:175157810-175205402 -  4q34.1   [Description]    (hg19-Feb_2009)
EnsemblFBXO8 - 4q34.1 [CytoView]
Mapping of homologs : NCBIFBXO8 [Mapview]
OMIM605649   
Gene and transcription
Genbank (Entrez)AF115514 AF174596 AF201932 AF233224 AK026319
RefSeq transcript (SRS)NM_012180
RefSeq transcript (Entrez)NM_012180
RefSeq genomic (SRS)AC_000136 NC_000004 NC_018915 NT_016354 NW_001838921 NW_004078021
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NT_016354 NW_001838921 NW_004078021
Consensus coding sequences : CCDS (NCBI)FBXO8
Cluster EST : UnigeneHs.76917 [ SRS ] Hs.76917 [ NCBI ]
CGAP (NCI)Hs.76917
Alternative Splicing : Fast-db (Paris)GSHG0023658
Alternative Splicing GalleryENSG00000164117
Gene ExpressionFBXO8 [ NCBI-GEO ]   FBXO8 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRD0 (SRS) Q9NRD0 (Uniprot)
NextProtQ9NRD0
With graphics : InterProQ9NRD0
Splice isoforms : SwissVarQ9NRD0(Swissvar)
Domaine pattern : Prosite (SRS)FBOX (PS50181)    SEC7 (PS50190)   
Domaine pattern : Prosite (Expaxy)FBOX (PS50181)    SEC7 (PS50190)   
Domains : Interpro (SRS)F-box_dom_cyclin-like    Sec7    SEC7_alpha_orthog   
Domains : Interpro (EBI)F-box_dom_cyclin-like    Sec7    SEC7_alpha_orthog   
Related proteins : CluSTrQ9NRD0
Domain families : Pfam (SRS)Sec7 (PF01369)   
Domain families : Pfam (Sanger)Sec7 (PF01369)   
Domain families : Pfam (NCBI)pfam01369   
Domain families : Smart (EMBL)Sec7 (SM00222)  
DMDM26269
Blocks (Seattle)Q9NRD0
Human Protein AtlasENSG00000164117
HPRD07293
IPIIPI00016355   IPI00440377   IPI00383464   IPI00965051   IPI00965351   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRD0
IntAct (EBI)Q9NRD0
FunCoupENSG00000164117
REACTOMEFBXO8
Protein Interaction Database26269
BioGRIDFBXO8
InParanoidQ9NRD0
Interologous Interaction database Q9NRD0
IntegromeDBFBXO8
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FBXO8
SNP (GeneSNP Utah)FBXO8
SNP : HGBaseFBXO8
Genetic variants : HAPMAPFBXO8
Somatic Mutations in Cancer : COSMICFBXO8 
CONAN: Copy Number AnalysisFBXO8 
Mutations and Diseases : HGMDFBXO8
OMIM605649   
GENETests605649   
Disease Genetic AssociationFBXO8
Huge Navigator FBXO8 [HugePedia]  FBXO8 [HugeCancerGEM]
Genomic VariantsFBXO8  FBXO8 [DGVbeta]
ClinVarFBXO8
snp3D : Map Gene to Disease26269
General knowledge
Homologs : HomoloGeneFBXO8
Homology/Alignments : Family Browser (UCSC)FBXO8
Phylogenetic Trees/Animal Genes : TreeFamFBXO8
Chemical/Protein Interactions : CTD26269
Chemical/Pharm GKB GenePA28048
Clinical trialFBXO8
Cancer Resource (Charite)ENSG00000164117
Ontology : AmiGOubiquitin ligase complex  ARF guanyl-nucleotide exchange factor activity  ARF guanyl-nucleotide exchange factor activity  nucleus  trans-Golgi network  ubiquitin-dependent protein catabolic process  vesicle-mediated transport  actin cytoskeleton organization  cell junction  regulation of ARF protein signal transduction  
Ontology : EGO-EBIubiquitin ligase complex  ARF guanyl-nucleotide exchange factor activity  ARF guanyl-nucleotide exchange factor activity  nucleus  trans-Golgi network  ubiquitin-dependent protein catabolic process  vesicle-mediated transport  actin cytoskeleton organization  cell junction  regulation of ARF protein signal transduction  
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneFBXO8
iHOPFBXO8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:47:28 CEST 2013
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