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FMO3 (flavin containing monooxygenase 3)

Identity

Other namesFMOII
TMAU
dJ127D3.1
HGNC (Hugo) FMO3
LocusID (NCBI) 2328
Atlas_Id 45891
Location 1q24.3
Location_base_pair Starts at 171060018 and ends at 171086959 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FMO3   3771
Cards
Entrez_Gene (NCBI)FMO3  2328  flavin containing monooxygenase 3
GeneCards (Weizmann)FMO3
Ensembl hg19 (Hinxton)ENSG00000007933 [Gene_View]  chr1:171060018-171086959 [Contig_View]  FMO3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000007933 [Gene_View]  chr1:171060018-171086959 [Contig_View]  FMO3 [Vega]
ICGC DataPortalENSG00000007933
TCGA cBioPortalFMO3
AceView (NCBI)FMO3
Genatlas (Paris)FMO3
WikiGenes2328
SOURCE (Princeton)FMO3
Genomic and cartography
GoldenPath hg19 (UCSC)FMO3  -     chr1:171060018-171086959 +  1q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FMO3  -     1q24.3   [Description]    (hg38-Dec_2013)
EnsemblFMO3 - 1q24.3 [CytoView hg19]  FMO3 - 1q24.3 [CytoView hg38]
Mapping of homologs : NCBIFMO3 [Mapview hg19]  FMO3 [Mapview hg38]
OMIM136132   602079   
Gene and transcription
Genbank (Entrez)AI478384 AK223166 AK296105 AK298406 AK310785
RefSeq transcript (Entrez)NM_001002294 NM_001319173 NM_001319174 NM_006894
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_012690 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)FMO3
Cluster EST : UnigeneHs.445350 [ NCBI ]
CGAP (NCI)Hs.445350
Alternative Splicing : Fast-db (Paris)GSHG0001182
Alternative Splicing GalleryENSG00000007933
Gene ExpressionFMO3 [ NCBI-GEO ]   FMO3 [ EBI - ARRAY_EXPRESS ]   FMO3 [ SEEK ]   FMO3 [ MEM ]
Gene Expression Viewer (FireBrowse)FMO3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)2328
Protein : pattern, domain, 3D structure
UniProt/SwissProtP31513 (Uniprot)
NextProtP31513  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP31513
Splice isoforms : SwissVarP31513 (Swissvar)
Catalytic activity : Enzyme1.14.13.8 [ Enzyme-Expasy ]   1.14.13.81.14.13.8 [ IntEnz-EBI ]   1.14.13.8 [ BRENDA ]   1.14.13.8 [ KEGG ]   
PhosPhoSitePlusP31513
Domains : Interpro (EBI)DiMe-aniline_mOase    FAD/NAD-binding_dom    Flavin_mOase    Flavin_mOase-like    Flavin_mOase_3   
Domain families : Pfam (Sanger)FMO-like (PF00743)   
Domain families : Pfam (NCBI)pfam00743   
DMDM Disease mutations2328
Blocks (Seattle)FMO3
SuperfamilyP31513
Human Protein AtlasENSG00000007933
Peptide AtlasP31513
HPRD00633
IPIIPI00329033   IPI00922176   IPI01015963   
Protein Interaction databases
DIP (DOE-UCLA)P31513
IntAct (EBI)P31513
FunCoupENSG00000007933
BioGRIDFMO3
STRING (EMBL)FMO3
ZODIACFMO3
Ontologies - Pathways
QuickGOP31513
Ontology : AmiGOmonooxygenase activity  N,N-dimethylaniline monooxygenase activity  endoplasmic reticulum membrane  xenobiotic metabolic process  integral component of membrane  amino acid binding  drug metabolic process  trimethylamine monooxygenase activity  intracellular membrane-bounded organelle  flavin adenine dinucleotide binding  NADP binding  oxidation-reduction process  
Ontology : EGO-EBImonooxygenase activity  N,N-dimethylaniline monooxygenase activity  endoplasmic reticulum membrane  xenobiotic metabolic process  integral component of membrane  amino acid binding  drug metabolic process  trimethylamine monooxygenase activity  intracellular membrane-bounded organelle  flavin adenine dinucleotide binding  NADP binding  oxidation-reduction process  
Pathways : KEGGDrug metabolism - cytochrome P450   
NDEx Network
Atlas of Cancer Signalling NetworkFMO3
Wikipedia pathwaysFMO3
Orthology - Evolution
OrthoDB2328
GeneTree (enSembl)ENSG00000007933
Phylogenetic Trees/Animal Genes : TreeFamFMO3
Homologs : HomoloGeneFMO3
Homology/Alignments : Family Browser (UCSC)FMO3
Gene fusions - Rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerFMO3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FMO3
dbVarFMO3
ClinVarFMO3
1000_GenomesFMO3 
Exome Variant ServerFMO3
ExAC (Exome Aggregation Consortium)FMO3 (select the gene name)
SNP (GeneSNP Utah)FMO3
SNP : HGBaseFMO3
Genetic variants : HAPMAPFMO3
Genomic Variants (DGV)FMO3 [DGVbeta]
Mutations
ICGC Data PortalFMO3 
TCGA Data PortalFMO3 
Broad Tumor PortalFMO3
OASIS PortalFMO3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFMO3 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FMO3
DgiDB (Drug Gene Interaction Database)FMO3
DoCM (Curated mutations)FMO3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FMO3 (select a term)
intoGenFMO3
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)1:171060018-171086959
CONAN: Copy Number AnalysisFMO3 
Mutations and Diseases : HGMDFMO3
OMIM136132    602079   
MedgenFMO3
Genetic Testing Registry FMO3
NextProtP31513 [Medical]
TSGene2328
GENETestsFMO3
Huge Navigator FMO3 [HugePedia]  FMO3 [HugeCancerGEM]
snp3D : Map Gene to Disease2328
BioCentury BCIQFMO3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2328
Chemical/Pharm GKB GenePA166
Clinical trialFMO3
Miscellaneous
canSAR (ICR)FMO3 (select the gene name)
Probes
Litterature
PubMed95 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFMO3
GoPubMedFMO3
iHOPFMO3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Apr 16 17:45:08 CEST 2016

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