Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret
Donations are also welcome
If each casual visitor gives 3 Euros or Dollars, the Atlas is saved in a week !
If each professional gives 100 Euros or Dollars once a year (now), the Atlas is saved in 2 weeks !
Don't let the Atlas imminent demise
Note: we send fiscal receipts for donations equal or above 50 Euros or Dollars

Donate (in Euros)

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FMO5 (flavin containing monooxygenase 5)


Other names-
HGNC (Hugo) FMO5
LocusID (NCBI) 2330
Location 1q21.1
Location_base_pair Starts at 146655884 and ends at 146697230 bp from pter ( according to hg19-Feb_2009)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)FMO5   3773
Entrez_Gene (NCBI)FMO5  2330  flavin containing monooxygenase 5
GeneCards (Weizmann)FMO5
Ensembl hg19 (Hinxton)ENSG00000131781 [Gene_View]  chr1:146655884-146697230 [Contig_View]  FMO5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000131781 [Gene_View]  chr1:146655884-146697230 [Contig_View]  FMO5 [Vega]
ICGC DataPortalENSG00000131781
AceView (NCBI)FMO5
Genatlas (Paris)FMO5
SOURCE (Princeton)FMO5
Genomic and cartography
GoldenPath hg19 (UCSC)FMO5  -     chr1:146655884-146697230 -  1q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FMO5  -     1q21.1   [Description]    (hg38-Dec_2013)
EnsemblFMO5 - 1q21.1 [CytoView hg19]  FMO5 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIFMO5 [Mapview hg19]  FMO5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022172 AK222728 AK225739 AK314647 BC020872
RefSeq transcript (Entrez)NM_001144829 NM_001144830 NM_001461
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)FMO5
Cluster EST : UnigeneHs.642706 [ NCBI ]
CGAP (NCI)Hs.642706
Alternative Splicing : Fast-db (Paris)GSHG0002452
Alternative Splicing GalleryENSG00000131781
Gene ExpressionFMO5 [ NCBI-GEO ]     FMO5 [ SEEK ]   FMO5 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP49326 (Uniprot)
NextProtP49326  [Medical]
With graphics : InterProP49326
Splice isoforms : SwissVarP49326 (Swissvar)
Catalytic activity : Enzyme1.14.13.8 [ Enzyme-Expasy ] [ IntEnz-EBI ] [ BRENDA ] [ KEGG ]   
Domains : Interpro (EBI)DiMe-aniline_mOase    Flavin_mOase    Flavin_mOase-like    Flavin_mOase_5    NAD(P)-bd_dom   
Related proteins : CluSTrP49326
Domain families : Pfam (Sanger)FMO-like (PF00743)   
Domain families : Pfam (NCBI)pfam00743   
DMDM Disease mutations2330
Blocks (Seattle)P49326
Human Protein AtlasENSG00000131781
Peptide AtlasP49326
IPIIPI00215760   IPI00643673   IPI00980244   IPI00921588   IPI00980970   IPI00982295   
Protein Interaction databases
IntAct (EBI)P49326
Ontologies - Pathways
Ontology : AmiGON,N-dimethylaniline monooxygenase activity  endoplasmic reticulum membrane  biological_process  integral component of membrane  flavin adenine dinucleotide binding  NADP binding  oxidation-reduction process  
Ontology : EGO-EBIN,N-dimethylaniline monooxygenase activity  endoplasmic reticulum membrane  biological_process  integral component of membrane  flavin adenine dinucleotide binding  NADP binding  oxidation-reduction process  
Pathways : KEGGDrug metabolism - cytochrome P450   
Protein Interaction DatabaseFMO5
DoCM (Curated mutations)FMO5
Wikipedia pathwaysFMO5
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerFMO5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FMO5
Exome Variant ServerFMO5
SNP (GeneSNP Utah)FMO5
Genetic variants : HAPMAPFMO5
Genomic Variants (DGV)FMO5 [DGVbeta]
ICGC Data PortalENSG00000131781 
Somatic Mutations in Cancer : COSMICFMO5 
CONAN: Copy Number AnalysisFMO5 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
DECIPHER (Syndromes)1:146655884-146697230
Mutations and Diseases : HGMDFMO5
NextProtP49326 [Medical]
Disease Genetic AssociationFMO5
Huge Navigator FMO5 [HugePedia]  FMO5 [HugeCancerGEM]
snp3D : Map Gene to Disease2330
DGIdb (Drug Gene Interaction db)FMO5
General knowledge
Homologs : HomoloGeneFMO5
Homology/Alignments : Family Browser (UCSC)FMO5
Phylogenetic Trees/Animal Genes : TreeFamFMO5
Chemical/Protein Interactions : CTD2330
Chemical/Pharm GKB GenePA28189
Clinical trialFMO5
Cancer Resource (Charite)ENSG00000131781
Other databases
PubMed20 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI


Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Mar 28 15:25:46 CET 2015

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