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FMO5 (flavin containing monooxygenase 5)

Identity

HGNC (Hugo) FMO5
LocusID (NCBI) 2330
Atlas_Id 40615
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 146655884 and ends at 146697230 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FMO5 (1q21.1) / FMO5 (1q21.1)MPPE1 (18p11.21) / FMO5 (1q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FMO5   3773
Cards
Entrez_Gene (NCBI)FMO5  2330  flavin containing monooxygenase 5
Aliases
GeneCards (Weizmann)FMO5
Ensembl hg19 (Hinxton)ENSG00000131781 [Gene_View]  chr1:146655884-146697230 [Contig_View]  FMO5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000131781 [Gene_View]  chr1:146655884-146697230 [Contig_View]  FMO5 [Vega]
ICGC DataPortalENSG00000131781
TCGA cBioPortalFMO5
AceView (NCBI)FMO5
Genatlas (Paris)FMO5
WikiGenes2330
SOURCE (Princeton)FMO5
Genetics Home Reference (NIH)FMO5
Genomic and cartography
GoldenPath hg19 (UCSC)FMO5  -     chr1:146655884-146697230 -  1q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FMO5  -     1q21.1   [Description]    (hg38-Dec_2013)
EnsemblFMO5 - 1q21.1 [CytoView hg19]  FMO5 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIFMO5 [Mapview hg19]  FMO5 [Mapview hg38]
OMIM603957   
Gene and transcription
Genbank (Entrez)AK022172 AK222728 AK225739 AK314647 BC020872
RefSeq transcript (Entrez)NM_001144829 NM_001144830 NM_001461
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)FMO5
Cluster EST : UnigeneHs.642706 [ NCBI ]
CGAP (NCI)Hs.642706
Alternative Splicing GalleryENSG00000131781
Gene ExpressionFMO5 [ NCBI-GEO ]   FMO5 [ EBI - ARRAY_EXPRESS ]   FMO5 [ SEEK ]   FMO5 [ MEM ]
Gene Expression Viewer (FireBrowse)FMO5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2330
GTEX Portal (Tissue expression)FMO5
Protein : pattern, domain, 3D structure
UniProt/SwissProtP49326   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP49326  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP49326
Splice isoforms : SwissVarP49326
Catalytic activity : Enzyme1.14.13.8 [ Enzyme-Expasy ]   1.14.13.81.14.13.8 [ IntEnz-EBI ]   1.14.13.8 [ BRENDA ]   1.14.13.8 [ KEGG ]   
PhosPhoSitePlusP49326
Domains : Interpro (EBI)DiMe-aniline_mOase    FAD/NAD-binding_dom    Flavin_mOase    Flavin_mOase-like    Flavin_mOase_5    NAD(P)-bd_dom   
Domain families : Pfam (Sanger)FMO-like (PF00743)   
Domain families : Pfam (NCBI)pfam00743   
Conserved Domain (NCBI)FMO5
DMDM Disease mutations2330
Blocks (Seattle)FMO5
SuperfamilyP49326
Human Protein AtlasENSG00000131781
Peptide AtlasP49326
HPRD04904
IPIIPI00215760   IPI00643673   IPI00980244   IPI00921588   IPI00980970   IPI00982295   
Protein Interaction databases
DIP (DOE-UCLA)P49326
IntAct (EBI)P49326
FunCoupENSG00000131781
BioGRIDFMO5
STRING (EMBL)FMO5
ZODIACFMO5
Ontologies - Pathways
QuickGOP49326
Ontology : AmiGON,N-dimethylaniline monooxygenase activity  cytoplasm  endoplasmic reticulum  endoplasmic reticulum membrane  biological_process  integral component of membrane  drug metabolic process  flavin adenine dinucleotide binding  NADP binding  oxidation-reduction process  
Ontology : EGO-EBIN,N-dimethylaniline monooxygenase activity  cytoplasm  endoplasmic reticulum  endoplasmic reticulum membrane  biological_process  integral component of membrane  drug metabolic process  flavin adenine dinucleotide binding  NADP binding  oxidation-reduction process  
Pathways : KEGGDrug metabolism - cytochrome P450   
NDEx NetworkFMO5
Atlas of Cancer Signalling NetworkFMO5
Wikipedia pathwaysFMO5
Orthology - Evolution
OrthoDB2330
GeneTree (enSembl)ENSG00000131781
Phylogenetic Trees/Animal Genes : TreeFamFMO5
HOVERGENP49326
HOGENOMP49326
Homologs : HomoloGeneFMO5
Homology/Alignments : Family Browser (UCSC)FMO5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFMO5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FMO5
dbVarFMO5
ClinVarFMO5
1000_GenomesFMO5 
Exome Variant ServerFMO5
ExAC (Exome Aggregation Consortium)FMO5 (select the gene name)
Genetic variants : HAPMAP2330
Genomic Variants (DGV)FMO5 [DGVbeta]
DECIPHER (Syndromes)1:146655884-146697230  ENSG00000131781
CONAN: Copy Number AnalysisFMO5 
Mutations
ICGC Data PortalFMO5 
TCGA Data PortalFMO5 
Broad Tumor PortalFMO5
OASIS PortalFMO5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFMO5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFMO5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FMO5
DgiDB (Drug Gene Interaction Database)FMO5
DoCM (Curated mutations)FMO5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FMO5 (select a term)
intoGenFMO5
Cancer3DFMO5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603957   
Orphanet
MedgenFMO5
Genetic Testing Registry FMO5
NextProtP49326 [Medical]
TSGene2330
GENETestsFMO5
Huge Navigator FMO5 [HugePedia]
snp3D : Map Gene to Disease2330
BioCentury BCIQFMO5
ClinGenFMO5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2330
Chemical/Pharm GKB GenePA28189
Clinical trialFMO5
Miscellaneous
canSAR (ICR)FMO5 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFMO5
EVEXFMO5
GoPubMedFMO5
iHOPFMO5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Nov 18 19:37:39 CET 2016

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