FXN (frataxin)

Identity

Other names	CyaY
	FA
	FARR
	FRDA
	MGC57199
	X25
HGNC	FXN
Location	9q21.11
Location_base_pair	Starts at 70840164 and ends at 70878772 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FXN   3951
Entrez_Gene	FXN  2395  frataxin
	Cards
GeneCards	FXN
Ensembl	FXN [Search_View]   ENSG00000165060 [Gene_View]
Genatlas	FXN
GeneLynx	FXN
eGenome	FXN
euGene	2395
	Genomic and cartography
GoldenPath	FXN  -  9q21.11   chr9:70840164-70878772 +  9q21.11   [Description]    (hg18-March_2006)
Ensembl	FXN - 9q21.11 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FXN
	Gene and transcription
Genbank	AI951739 [ ENTREZ ]
Genbank	AK308620 [ ENTREZ ]
Genbank	BC023633 [ ENTREZ ]
Genbank	BC048097 [ ENTREZ ]
Genbank	U43747 [ ENTREZ ]
RefSeq	NM_000144 [ SRS ]    NM_000144 [ ENTREZ ]
RefSeq	NM_181425 [ SRS ]    NM_181425 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_023935 [ SRS ]    NT_023935 [ ENTREZ ]
RefSeq	NW_001839221 [ SRS ]    NW_001839221 [ ENTREZ ]
RefSeq	NW_924484 [ SRS ]    NW_924484 [ ENTREZ ]
AceView	FXN AceView - NCBI
Unigene	Hs.29978 [ SRS ]    Hs.29978 [ NCBI ]     HS29978 [ spliceNest ]
Fast-db	8045 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O96034 [ SRS]    O96034 [ EXPASY ]     O96034 [ INTERPRO ]     O96034 [ UNIPROT ]
Interpro	IPR001794 Frataxin_sub [ SRS ]    IPR001794 Frataxin_sub [ EBI ]
CluSTr	O96034
Blocks	O96034
HPRD	06013
	Protein Interaction databases
DIP	O96034
IntAct	O96034
	Polymorphism : SNP, mutations, diseases
OMIM	229300;606829    [ map ]
GENECLINICS	229300;606829
SNP	FXN [dbSNP-NCBI]
SNP	NM_000144 [SNP-NCI]
SNP	NM_181425 [SNP-NCI]
SNP	FXN [GeneSNPs - Utah]  FXN] [HGBASE - SRS]
HAPMAP	FXN [HAPMAP]
COSMIC	FXN [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	FXN
	General knowledge
Family Browser	FXN [UCSC Family Browser]
SOURCE	NM_000144
SOURCE	NM_181425
SMD	Hs.29978
SAGE	Hs.29978
GO	inositol or phosphatidylinositol kinase activity [Amigo]  inositol or phosphatidylinositol kinase activity
GO	iron ion transmembrane transporter activity [Amigo]  iron ion transmembrane transporter activity
GO	mitochondrion [Amigo]  mitochondrion
GO	mitochondrion [Amigo]  mitochondrion
GO	cellular iron ion homeostasis [Amigo]  cellular iron ion homeostasis
GO	cellular iron ion homeostasis [Amigo]  cellular iron ion homeostasis
GO	synaptic transmission [Amigo]  synaptic transmission
GO	electron carrier activity [Amigo]  electron carrier activity
GO	vesicle-mediated transport [Amigo]  vesicle-mediated transport
GO	oxidation reduction [Amigo]  oxidation reduction
PubGene	FXN
TreeFam	FXN
CTD	2395 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FXN Related clones (RZPD - Berlin)
	PubMed
PubMed	64 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:42:21 2008