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IKZF3 (IKAROS family zinc finger 3)

Identity

Alias (NCBI)AIO
AIOLOS
ZNFN1A3
HGNC (Hugo) IKZF3
HGNC Alias symbAiolos
HGNC Previous nameZNFN1A3
HGNC Previous namezinc finger protein, subfamily 1A, 3 (Aiolos)
 IKAROS family zinc finger 3 (Aiolos)
LocusID (NCBI) 22806
Atlas_Id 46122
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 39757719 and ends at 39864312 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CDC6 (17q21.2) / IKZF3 (17q12)CDK8 (13q12.13) / IKZF3 (17q12)ENDOV (17q25.3) / IKZF3 (17q12)
IKZF3 (17q12) / BCAS3 (17q23.2)IKZF3 (17q12) / ETV3 (1q23.1)IKZF3 (17q12) / RPL12 (9q33.3)
LUC7L3 (17q21.33) / IKZF3 (17q12)RAD54B (8q22.1) / IKZF3 (17q12)SKAP1 (17q21.32) / IKZF3 (17q12)
SMURF2 (17q23.3) / IKZF3 (17q12)VAPB (20q13.32) / IKZF3 (17q12)CDK8 13q12.13 / IKZF3 17q12
ENDOV 17q25.3 / IKZF3 17q12IKZF3 17q12 / BCAS3 17q23.2LUC7L3 17q21.33 / IKZF3 17q12
SKAP1 17q21.32 / IKZF3 17q12SMURF2 17q23.3 / IKZF3 17q12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  Blastic Plasmacytoid Dendritic Cell Neoplasm (BPDCN)
t(1;17)(q23;q12) IKZF3/ETV3


External links

Nomenclature
HGNC (Hugo)IKZF3   13178
Cards
Entrez_Gene (NCBI)IKZF3    IKAROS family zinc finger 3
AliasesAIO; AIOLOS; ZNFN1A3
GeneCards (Weizmann)IKZF3
Ensembl hg19 (Hinxton)ENSG00000161405 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000161405 [Gene_View]  ENSG00000161405 [Sequence]  chr17:39757719-39864312 [Contig_View]  IKZF3 [Vega]
ICGC DataPortalENSG00000161405
TCGA cBioPortalIKZF3
AceView (NCBI)IKZF3
Genatlas (Paris)IKZF3
SOURCE (Princeton)IKZF3
Genetics Home Reference (NIH)IKZF3
Genomic and cartography
GoldenPath hg38 (UCSC)IKZF3  -     chr17:39757719-39864312 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IKZF3  -     17q12   [Description]    (hg19-Feb_2009)
GoldenPathIKZF3 - 17q12 [CytoView hg19]  IKZF3 - 17q12 [CytoView hg38]
ImmunoBaseENSG00000161405
Genome Data Viewer NCBIIKZF3 [Mapview hg19]  
OMIM606221   
Gene and transcription
Genbank (Entrez)AF086054 AF129512 AI866838 AJ292565 AJ292566
RefSeq transcript (Entrez)NM_001257408 NM_001257409 NM_001257410 NM_001257411 NM_001257412 NM_001257413 NM_001257414 NM_001284514 NM_001284515 NM_001284516 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232
Consensus coding sequences : CCDS (NCBI)IKZF3
Gene ExpressionIKZF3 [ NCBI-GEO ]   IKZF3 [ EBI - ARRAY_EXPRESS ]   IKZF3 [ SEEK ]   IKZF3 [ MEM ]
Gene Expression Viewer (FireBrowse)IKZF3 [ Firebrowse - Broad ]
GenevisibleExpression of IKZF3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22806
GTEX Portal (Tissue expression)IKZF3
Human Protein AtlasENSG00000161405-IKZF3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IKZF3
Human Protein Atlas [tissue]ENSG00000161405-IKZF3 [tissue]
HPRD05869
Protein Interaction databases
BioGRIDIKZF3
STRING (EMBL)IKZF3
ZODIACIKZF3
Ontologies - Pathways
Litterature
PubMed94 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXIKZF3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:13:41 CEST 2021

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