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IL13RA2 (interleukin 13 receptor subunit alpha 2)

Identity

Alias_namesinterleukin 13 receptor
Alias_symbol (synonym)IL-13R
IL13BP
CD213a2
CT19
Other aliasCD213A2
HGNC (Hugo) IL13RA2
LocusID (NCBI) 3598
Atlas_Id 45978
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 114238538 and ends at 114252207 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL13RA2   5975
Cards
Entrez_Gene (NCBI)IL13RA2  3598  interleukin 13 receptor subunit alpha 2
AliasesCD213A2; CT19; IL-13R; IL13BP
GeneCards (Weizmann)IL13RA2
Ensembl hg19 (Hinxton)ENSG00000123496 [Gene_View]  chrX:114238538-114252207 [Contig_View]  IL13RA2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000123496 [Gene_View]  chrX:114238538-114252207 [Contig_View]  IL13RA2 [Vega]
ICGC DataPortalENSG00000123496
TCGA cBioPortalIL13RA2
AceView (NCBI)IL13RA2
Genatlas (Paris)IL13RA2
WikiGenes3598
SOURCE (Princeton)IL13RA2
Genetics Home Reference (NIH)IL13RA2
Genomic and cartography
GoldenPath hg19 (UCSC)IL13RA2  -     chrX:114238538-114252207 -  Xq23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IL13RA2  -     Xq23   [Description]    (hg38-Dec_2013)
EnsemblIL13RA2 - Xq23 [CytoView hg19]  IL13RA2 - Xq23 [CytoView hg38]
Mapping of homologs : NCBIIL13RA2 [Mapview hg19]  IL13RA2 [Mapview hg38]
OMIM300130   
Gene and transcription
Genbank (Entrez)AK291957 AK308523 AK309444 BC020739 BC033705
RefSeq transcript (Entrez)NM_000640
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_012514 NT_028405 NW_004929445
Consensus coding sequences : CCDS (NCBI)IL13RA2
Cluster EST : UnigeneHs.336046 [ NCBI ]
CGAP (NCI)Hs.336046
Alternative Splicing GalleryENSG00000123496
Gene ExpressionIL13RA2 [ NCBI-GEO ]   IL13RA2 [ EBI - ARRAY_EXPRESS ]   IL13RA2 [ SEEK ]   IL13RA2 [ MEM ]
Gene Expression Viewer (FireBrowse)IL13RA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3598
GTEX Portal (Tissue expression)IL13RA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14627   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14627  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14627
Splice isoforms : SwissVarQ14627
PhosPhoSitePlusQ14627
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    HEMATOPO_REC_S_F2 (PS01356)   
Domains : Interpro (EBI)FN3_dom    Ig-like_fold    Short_hematopoietin_rcpt_2_CS    TypeI_recpt_CBD   
Domain families : Pfam (Sanger)IL6Ra-bind (PF09240)   
Domain families : Pfam (NCBI)pfam09240   
Conserved Domain (NCBI)IL13RA2
DMDM Disease mutations3598
Blocks (Seattle)IL13RA2
PDB (SRS)3LB6   
PDB (PDBSum)3LB6   
PDB (IMB)3LB6   
PDB (RSDB)3LB6   
Structural Biology KnowledgeBase3LB6   
SCOP (Structural Classification of Proteins)3LB6   
CATH (Classification of proteins structures)3LB6   
SuperfamilyQ14627
Human Protein AtlasENSG00000123496
Peptide AtlasQ14627
HPRD02132
IPIIPI00032199   
Protein Interaction databases
DIP (DOE-UCLA)Q14627
IntAct (EBI)Q14627
FunCoupENSG00000123496
BioGRIDIL13RA2
STRING (EMBL)IL13RA2
ZODIACIL13RA2
Ontologies - Pathways
QuickGOQ14627
Ontology : AmiGOnegative regulation of immunoglobulin production  signal transducer activity  cytokine receptor activity  extracellular region  extracellular space  signal transduction  integral component of membrane  immunoglobulin mediated immune response  cytokine-mediated signaling pathway  cytokine-mediated signaling pathway  negative regulation of mast cell degranulation  cellular response to mechanical stimulus  
Ontology : EGO-EBInegative regulation of immunoglobulin production  signal transducer activity  cytokine receptor activity  extracellular region  extracellular space  signal transduction  integral component of membrane  immunoglobulin mediated immune response  cytokine-mediated signaling pathway  cytokine-mediated signaling pathway  negative regulation of mast cell degranulation  cellular response to mechanical stimulus  
Pathways : KEGGJak-STAT signaling pathway   
NDEx NetworkIL13RA2
Atlas of Cancer Signalling NetworkIL13RA2
Wikipedia pathwaysIL13RA2
Orthology - Evolution
OrthoDB3598
GeneTree (enSembl)ENSG00000123496
Phylogenetic Trees/Animal Genes : TreeFamIL13RA2
HOVERGENQ14627
HOGENOMQ14627
Homologs : HomoloGeneIL13RA2
Homology/Alignments : Family Browser (UCSC)IL13RA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL13RA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL13RA2
dbVarIL13RA2
ClinVarIL13RA2
1000_GenomesIL13RA2 
Exome Variant ServerIL13RA2
ExAC (Exome Aggregation Consortium)IL13RA2 (select the gene name)
Genetic variants : HAPMAP3598
Genomic Variants (DGV)IL13RA2 [DGVbeta]
DECIPHER (Syndromes)X:114238538-114252207  ENSG00000123496
CONAN: Copy Number AnalysisIL13RA2 
Mutations
ICGC Data PortalIL13RA2 
TCGA Data PortalIL13RA2 
Broad Tumor PortalIL13RA2
OASIS PortalIL13RA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL13RA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL13RA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch IL13RA2
DgiDB (Drug Gene Interaction Database)IL13RA2
DoCM (Curated mutations)IL13RA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL13RA2 (select a term)
intoGenIL13RA2
Cancer3DIL13RA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300130   
Orphanet
MedgenIL13RA2
Genetic Testing Registry IL13RA2
NextProtQ14627 [Medical]
TSGene3598
GENETestsIL13RA2
Huge Navigator IL13RA2 [HugePedia]
snp3D : Map Gene to Disease3598
BioCentury BCIQIL13RA2
ClinGenIL13RA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3598
Chemical/Pharm GKB GenePA29788
Clinical trialIL13RA2
Miscellaneous
canSAR (ICR)IL13RA2 (select the gene name)
Probes
Litterature
PubMed69 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL13RA2
EVEXIL13RA2
GoPubMedIL13RA2
iHOPIL13RA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:05:02 CEST 2017

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