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IL13RA2 (interleukin 13 receptor subunit alpha 2)

Identity

Alias (NCBI)CD213A2
CT19
IL-13R
IL13BP
HGNC (Hugo) IL13RA2
HGNC Alias symbIL-13R
IL13BP
CD213a2
CT19
HGNC Alias namecancer/testis antigen 19
HGNC Previous nameinterleukin 13 receptor, alpha 2
LocusID (NCBI) 3598
Atlas_Id 45978
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 115003982 and ends at 115017616 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)IL13RA2   5975
Cards
Entrez_Gene (NCBI)IL13RA2    interleukin 13 receptor subunit alpha 2
AliasesCD213A2; CT19; IL-13R; IL13BP
GeneCards (Weizmann)IL13RA2
Ensembl hg19 (Hinxton)ENSG00000123496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123496 [Gene_View]  ENSG00000123496 [Sequence]  chrX:115003982-115017616 [Contig_View]  IL13RA2 [Vega]
ICGC DataPortalENSG00000123496
TCGA cBioPortalIL13RA2
AceView (NCBI)IL13RA2
Genatlas (Paris)IL13RA2
SOURCE (Princeton)IL13RA2
Genetics Home Reference (NIH)IL13RA2
Genomic and cartography
GoldenPath hg38 (UCSC)IL13RA2  -     chrX:115003982-115017616 -  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL13RA2  -     Xq23   [Description]    (hg19-Feb_2009)
GoldenPathIL13RA2 - Xq23 [CytoView hg19]  IL13RA2 - Xq23 [CytoView hg38]
ImmunoBaseENSG00000123496
Genome Data Viewer NCBIIL13RA2 [Mapview hg19]  
OMIM300130   
Gene and transcription
Genbank (Entrez)AK291957 AK308523 AK309444 BC020739 BC033705
RefSeq transcript (Entrez)NM_000640
Consensus coding sequences : CCDS (NCBI)IL13RA2
Gene ExpressionIL13RA2 [ NCBI-GEO ]   IL13RA2 [ EBI - ARRAY_EXPRESS ]   IL13RA2 [ SEEK ]   IL13RA2 [ MEM ]
Gene Expression Viewer (FireBrowse)IL13RA2 [ Firebrowse - Broad ]
GenevisibleExpression of IL13RA2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3598
GTEX Portal (Tissue expression)IL13RA2
Human Protein AtlasENSG00000123496-IL13RA2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14627   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14627  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14627
PhosPhoSitePlusQ14627
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    HEMATOPO_REC_S_F2 (PS01356)   
Domains : Interpro (EBI)FN3_dom    FN3_sf    Ig-like_fold    Short_hematopoietin_rcpt_2_CS    TypeI_recpt_CBD   
Domain families : Pfam (Sanger)IL6Ra-bind (PF09240)   
Domain families : Pfam (NCBI)pfam09240   
Conserved Domain (NCBI)IL13RA2
PDB (RSDB)3LB6   
PDB Europe3LB6   
PDB (PDBSum)3LB6   
PDB (IMB)3LB6   
Structural Biology KnowledgeBase3LB6   
SCOP (Structural Classification of Proteins)3LB6   
CATH (Classification of proteins structures)3LB6   
SuperfamilyQ14627
AlphaFold pdb e-kbQ14627   
Human Protein Atlas [tissue]ENSG00000123496-IL13RA2 [tissue]
HPRD02132
Protein Interaction databases
DIP (DOE-UCLA)Q14627
IntAct (EBI)Q14627
BioGRIDIL13RA2
STRING (EMBL)IL13RA2
ZODIACIL13RA2
Ontologies - Pathways
QuickGOQ14627
Ontology : AmiGOnegative regulation of immunoglobulin production  cytokine receptor activity  cytokine receptor activity  protein binding  extracellular region  extracellular space  external side of plasma membrane  integral component of membrane  immunoglobulin mediated immune response  cytokine-mediated signaling pathway  cytokine binding  receptor complex  negative regulation of mast cell degranulation  
Ontology : EGO-EBInegative regulation of immunoglobulin production  cytokine receptor activity  cytokine receptor activity  protein binding  extracellular region  extracellular space  external side of plasma membrane  integral component of membrane  immunoglobulin mediated immune response  cytokine-mediated signaling pathway  cytokine binding  receptor complex  negative regulation of mast cell degranulation  
Pathways : KEGGKEGG_JAK_STAT_SIGNALING   
NDEx NetworkIL13RA2
Atlas of Cancer Signalling NetworkIL13RA2
Wikipedia pathwaysIL13RA2
Orthology - Evolution
OrthoDB3598
GeneTree (enSembl)ENSG00000123496
Phylogenetic Trees/Animal Genes : TreeFamIL13RA2
Homologs : HomoloGeneIL13RA2
Homology/Alignments : Family Browser (UCSC)IL13RA2
Gene fusions - Rearrangements
Fusion : QuiverIL13RA2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL13RA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL13RA2
dbVarIL13RA2
ClinVarIL13RA2
MonarchIL13RA2
1000_GenomesIL13RA2 
Exome Variant ServerIL13RA2
GNOMAD BrowserENSG00000123496
Varsome BrowserIL13RA2
ACMGIL13RA2 variants
VarityQ14627
Genomic Variants (DGV)IL13RA2 [DGVbeta]
DECIPHERIL13RA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL13RA2 
Mutations
ICGC Data PortalIL13RA2 
TCGA Data PortalIL13RA2 
Broad Tumor PortalIL13RA2
OASIS PortalIL13RA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL13RA2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DIL13RA2
Mutations and Diseases : HGMDIL13RA2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaIL13RA2
DgiDB (Drug Gene Interaction Database)IL13RA2
DoCM (Curated mutations)IL13RA2
CIViC (Clinical Interpretations of Variants in Cancer)IL13RA2
Cancer3DIL13RA2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300130   
Orphanet
DisGeNETIL13RA2
MedgenIL13RA2
Genetic Testing Registry IL13RA2
NextProtQ14627 [Medical]
GENETestsIL13RA2
Target ValidationIL13RA2
Huge Navigator IL13RA2 [HugePedia]
ClinGenIL13RA2
Clinical trials, drugs, therapy
MyCancerGenomeIL13RA2
Protein Interactions : CTDIL13RA2
Pharm GKB GenePA29788
PharosQ14627
Clinical trialIL13RA2
Miscellaneous
canSAR (ICR)IL13RA2
HarmonizomeIL13RA2
ARCHS4IL13RA2
DataMed IndexIL13RA2
Probes
Litterature
PubMed107 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXIL13RA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:38:24 CET 2022

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