Atlas of Genetics and Cytogenetics in Oncology and Haematology

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IL1RAPL1 (interleukin 1 receptor accessory protein-like 1)

Identity

Other namesIL1R8
IL1RAPL
MRX10
MRX21
MRX34
OPHN4
TIGIRR-2
HGNC (Hugo) IL1RAPL1
LocusID (NCBI) 11141
Location Xp21.3
Location_base_pair Starts at 28605681 and ends at 29974017 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)IL1RAPL1   5996
Entrez_Gene (NCBI)IL1RAPL1  11141  interleukin 1 receptor accessory protein-like 1
Cards
GeneCards (Weizmann)IL1RAPL1
Ensembl (Hinxton) [Gene_View]  chrX:28605681-29974017 [Contig_View]  IL1RAPL1 [Vega]
AceView (NCBI)IL1RAPL1
Genatlas (Paris)IL1RAPL1
SOURCE (Stanford)NM_014271
Genomic and cartography
GoldenPath (UCSC)IL1RAPL1  -  Xp21.3   chrX:28605681-29974017 +  Xp21.3   [Description]    (hg19-Feb_2009)
EnsemblIL1RAPL1 - Xp21.3 [CytoView]
Mapping of homologs : NCBIIL1RAPL1 [Mapview]
OMIM300143   300206   
Gene and transcription
Genbank (Entrez)AB102650 AF181284 AF284435 AJ243874 BC111918
RefSeq transcript (SRS)NM_014271
RefSeq transcript (Entrez)NM_014271
RefSeq genomic (SRS)AC_000155 NC_000023 NC_018934 NG_008292 NT_167197 NW_001842360 NW_004078118
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NG_008292 NT_167197 NW_001842360 NW_004078118
Consensus coding sequences : CCDS (NCBI)IL1RAPL1
Cluster EST : UnigeneHs.658912 [ SRS ] Hs.658912 [ NCBI ]
CGAP (NCI)Hs.658912
Alternative Splicing : Fast-db (Paris)GSHG0031444
Gene ExpressionIL1RAPL1 [ NCBI-GEO ]   IL1RAPL1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZN1 (SRS) Q9NZN1 (Uniprot)
NextProtQ9NZN1
With graphics : InterProQ9NZN1
Splice isoforms : SwissVarQ9NZN1(Swissvar)
Domaine pattern : Prosite (SRS)IG_LIKE (PS50835)    TIR (PS50104)   
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)    TIR (PS50104)   
Domains : Interpro (SRS)Ig-like_dom    Ig-like_fold    Ig_I-set    Ig_sub    Ig_sub2    IL1-receptor_fam    TIR_dom   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_I-set    Ig_sub    Ig_sub2    IL1-receptor_fam    TIR_dom   
Related proteins : CluSTrQ9NZN1
Domain families : Pfam (SRS)I-set (PF07679)    TIR (PF01582)   
Domain families : Pfam (Sanger)I-set (PF07679)    TIR (PF01582)   
Domain families : Pfam (NCBI)pfam07679    pfam01582   
Domain families : Smart (EMBL)IG (SM00409)  IGc2 (SM00408)  TIR (SM00255)  
DMDM11141
Blocks (Seattle)Q9NZN1
PDB (SRS)1T3G   
PDB (PDBSum)1T3G   
PDB (IMB)1T3G   
PDB (RSDB)1T3G   
HPRD02193
IPIIPI00431738   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZN1
IntAct (EBI)Q9NZN1
REACTOMEIL1RAPL1
Protein Interaction Database11141
BioGRIDIL1RAPL1
InParanoidQ9NZN1
Interologous Interaction database Q9NZN1
IntegromeDBIL1RAPL1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)IL1RAPL1
SNP (GeneSNP Utah)IL1RAPL1
SNP : HGBaseIL1RAPL1
Genetic variants : HAPMAPIL1RAPL1
Somatic Mutations in Cancer : COSMICIL1RAPL1 
CONAN: Copy Number AnalysisIL1RAPL1 
Mutations and Diseases : HGMDIL1RAPL1
OMIM300143    300206   
GENETests300143    300206   
Disease Genetic AssociationIL1RAPL1
Huge Navigator IL1RAPL1 [HugePedia]  IL1RAPL1 [HugeCancerGEM]
Genomic VariantsIL1RAPL1  IL1RAPL1 [DGVbeta]
ClinVarIL1RAPL1
snp3D : Map Gene to Disease11141
General knowledge
Homologs : HomoloGeneIL1RAPL1
Homology/Alignments : Family Browser (UCSC)IL1RAPL1
Phylogenetic Trees/Animal Genes : TreeFamIL1RAPL1
Chemical/Protein Interactions : CTD11141
Chemical/Pharm GKB GenePA29812
Clinical trialIL1RAPL1
Ontology : AmiGOreceptor binding  voltage-gated calcium channel activity  protein binding  cytoplasm  plasma membrane  heterophilic cell-cell adhesion  signal transduction  cell surface  regulation of neuron projection development  integral to membrane  interleukin-1 binding  neuron differentiation  axon  dendrite  postsynaptic membrane  negative regulation of exocytosis  positive regulation of dendrite morphogenesis  presynaptic membrane assembly  
Ontology : EGO-EBIreceptor binding  voltage-gated calcium channel activity  protein binding  cytoplasm  plasma membrane  heterophilic cell-cell adhesion  signal transduction  cell surface  regulation of neuron projection development  integral to membrane  interleukin-1 binding  neuron differentiation  axon  dendrite  postsynaptic membrane  negative regulation of exocytosis  positive regulation of dendrite morphogenesis  presynaptic membrane assembly  
Other databases
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
PubGeneIL1RAPL1
iHOPIL1RAPL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:39:47 CEST 2013
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