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IYD (iodotyrosine deiodinase)

Identity

Other namesC6orf71
DEHAL1
TDH4
dJ422F24.1
HGNC (Hugo) IYD
LocusID (NCBI) 389434
Location 6q25.1
Location_base_pair Starts at 150690028 and ends at 150725765 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)IYD   21071
Entrez_Gene (NCBI)IYD  389434  iodotyrosine deiodinase
Cards
GeneCards (Weizmann)IYD
Ensembl (Hinxton)ENSG00000009765 [Gene_View]  chr6:150690028-150725765 [Contig_View]  IYD [Vega]
AceView (NCBI)IYD
Genatlas (Paris)IYD
SOURCE (Stanford)NM_001164694 NM_001164695 NM_203395
Genomic and cartography
GoldenPath (UCSC)IYD  -  6q25.1   chr6:150690028-150725765 +  6q25.1   [Description]    (hg19-Feb_2009)
EnsemblIYD - 6q25.1 [CytoView]
Mapping of homologs : NCBIIYD [Mapview]
OMIM274800   612025   
Gene and transcription
Genbank (Entrez)AI823392 AK129950 AY259176 AY259177 AY424901
RefSeq transcript (SRS)NM_001164694 NM_001164695 NM_203395
RefSeq transcript (Entrez)NM_001164694 NM_001164695 NM_203395
RefSeq genomic (SRS)AC_000138 NC_000006 NC_018917 NG_016007 NT_025741 NW_001838990 NW_004078028
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NG_016007 NT_025741 NW_001838990 NW_004078028
Consensus coding sequences : CCDS (NCBI)IYD
Cluster EST : UnigeneHs.310225 [ SRS ] Hs.310225 [ NCBI ]
CGAP (NCI)Hs.310225
Alternative Splicing : Fast-db (Paris)GSHG0026118
Alternative Splicing GalleryENSG00000009765
Gene ExpressionIYD [ NCBI-GEO ]   IYD [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PHW0 (SRS) Q6PHW0 (Uniprot)
NextProtQ6PHW0
With graphics : InterProQ6PHW0
Splice isoforms : SwissVarQ6PHW0(Swissvar)
Domains : Interpro (SRS)Nitroreductase-like   
Domains : Interpro (EBI)Nitroreductase-like   
Related proteins : CluSTrQ6PHW0
Domain families : Pfam (SRS)Nitroreductase (PF00881)   
Domain families : Pfam (Sanger)Nitroreductase (PF00881)   
Domain families : Pfam (NCBI)pfam00881   
DMDM389434
Blocks (Seattle)Q6PHW0
Human Protein AtlasENSG00000009765
HPRD16668
IPIIPI00465267   IPI00736489   IPI00385533   IPI00738915   IPI00737829   IPI00657934   IPI00737444   IPI00940869   IPI01010554   IPI00737053   
Protein Interaction databases
DIP (DOE-UCLA)Q6PHW0
IntAct (EBI)Q6PHW0
FunCoupENSG00000009765
REACTOMEIYD
Protein Interaction Database389434
BioGRIDIYD
InParanoidQ6PHW0
Interologous Interaction database Q6PHW0
IntegromeDBIYD
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)IYD
SNP (GeneSNP Utah)IYD
SNP : HGBaseIYD
Genetic variants : HAPMAPIYD
Somatic Mutations in Cancer : COSMICIYD 
CONAN: Copy Number AnalysisIYD 
Mutations and Diseases : HGMDIYD
OMIM274800    612025   
GENETests274800    612025   
Disease Genetic AssociationIYD
Huge Navigator IYD [HugePedia]  IYD [HugeCancerGEM]
Genomic VariantsIYD  IYD [DGVbeta]
snp3D : Map Gene to Disease389434
General knowledge
Homologs : HomoloGeneIYD
Homology/Alignments : Family Browser (UCSC)IYD
Phylogenetic Trees/Animal Genes : TreeFamIYD
Catalytic activity : Enzyme1.22.1.1 [ Enzyme-Expasy ]   1.22.1.1 [ Enzyme-SRS ]   1.22.1.1 [ IntEnz-EBI ]   1.22.1.1 [ BRENDA ]   1.22.1.1 [ KEGG ]   
Chemical/Protein Interactions : CTD389434
Chemical/Pharm GKB GenePA162392352
Clinical trialIYD
Cancer Resource (Charite)ENSG00000009765
Ontology : AmiGOplasma membrane  thyroid hormone generation  integral to membrane  oxidoreductase activity  cellular nitrogen compound metabolic process  small molecule metabolic process  
Ontology : EGO-EBIplasma membrane  thyroid hormone generation  integral to membrane  oxidoreductase activity  cellular nitrogen compound metabolic process  small molecule metabolic process  
Other databases
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
PubGeneIYD
iHOPIYD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:37:11 CEST 2013
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