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MOBP (myelin-associated oligodendrocyte basic protein)

Identity

Other alias-
HGNC (Hugo) MOBP
LocusID (NCBI) 4336
Atlas_Id 54464
Location 3p22.1  [Link to chromosome band 3p22]
Location_base_pair Starts at 39467573 and ends at 39516003 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CEP128 (14q31.1) / MOBP (3p22.1)MOBP (3p22.1) / BOLA2 (16p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MOBP   7189
Cards
Entrez_Gene (NCBI)MOBP  4336  myelin-associated oligodendrocyte basic protein
Aliases
GeneCards (Weizmann)MOBP
Ensembl hg19 (Hinxton)ENSG00000168314 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168314 [Gene_View]  chr3:39467573-39516003 [Contig_View]  MOBP [Vega]
ICGC DataPortalENSG00000168314
TCGA cBioPortalMOBP
AceView (NCBI)MOBP
Genatlas (Paris)MOBP
WikiGenes4336
SOURCE (Princeton)MOBP
Genetics Home Reference (NIH)MOBP
Genomic and cartography
GoldenPath hg38 (UCSC)MOBP  -     chr3:39467573-39516003 +  3p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MOBP  -     3p22.1   [Description]    (hg19-Feb_2009)
EnsemblMOBP - 3p22.1 [CytoView hg19]  MOBP - 3p22.1 [CytoView hg38]
Mapping of homologs : NCBIMOBP [Mapview hg19]  MOBP [Mapview hg38]
OMIM600948   
Gene and transcription
Genbank (Entrez)AK094745 AK095118 AK095180 AK124766 AK127034
RefSeq transcript (Entrez)NM_001278322 NM_001278323 NM_182935
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MOBP
Cluster EST : UnigeneHs.594670 [ NCBI ]
CGAP (NCI)Hs.594670
Alternative Splicing GalleryENSG00000168314
Gene ExpressionMOBP [ NCBI-GEO ]   MOBP [ EBI - ARRAY_EXPRESS ]   MOBP [ SEEK ]   MOBP [ MEM ]
Gene Expression Viewer (FireBrowse)MOBP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4336
GTEX Portal (Tissue expression)MOBP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13875   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13875  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13875
Splice isoforms : SwissVarQ13875
PhosPhoSitePlusQ13875
Domains : Interpro (EBI)Mobp    Znf_FYVE_PHD   
Domain families : Pfam (Sanger)FYVE_2 (PF02318)   
Domain families : Pfam (NCBI)pfam02318   
Conserved Domain (NCBI)MOBP
DMDM Disease mutations4336
Blocks (Seattle)MOBP
SuperfamilyQ13875
Human Protein AtlasENSG00000168314
Peptide AtlasQ13875
HPRD02973
IPIIPI00337645   IPI00789227   IPI00456778   IPI00927585   IPI00926148   IPI00981643   
Protein Interaction databases
DIP (DOE-UCLA)Q13875
IntAct (EBI)Q13875
FunCoupENSG00000168314
BioGRIDMOBP
STRING (EMBL)MOBP
ZODIACMOBP
Ontologies - Pathways
QuickGOQ13875
Ontology : AmiGOprotein binding  mitochondrion  nervous system development  structural constituent of myelin sheath  myelin sheath  perinuclear region of cytoplasm  
Ontology : EGO-EBIprotein binding  mitochondrion  nervous system development  structural constituent of myelin sheath  myelin sheath  perinuclear region of cytoplasm  
NDEx NetworkMOBP
Atlas of Cancer Signalling NetworkMOBP
Wikipedia pathwaysMOBP
Orthology - Evolution
OrthoDB4336
GeneTree (enSembl)ENSG00000168314
Phylogenetic Trees/Animal Genes : TreeFamMOBP
HOVERGENQ13875
HOGENOMQ13875
Homologs : HomoloGeneMOBP
Homology/Alignments : Family Browser (UCSC)MOBP
Gene fusions - Rearrangements
Fusion : MitelmanCEP128/MOBP [14q31.1/3p22.1]  [t(3;14)(p22;q31)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMOBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MOBP
dbVarMOBP
ClinVarMOBP
1000_GenomesMOBP 
Exome Variant ServerMOBP
ExAC (Exome Aggregation Consortium)MOBP (select the gene name)
Genetic variants : HAPMAP4336
Genomic Variants (DGV)MOBP [DGVbeta]
DECIPHERMOBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMOBP 
Mutations
ICGC Data PortalMOBP 
TCGA Data PortalMOBP 
Broad Tumor PortalMOBP
OASIS PortalMOBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMOBP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMOBP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MOBP
DgiDB (Drug Gene Interaction Database)MOBP
DoCM (Curated mutations)MOBP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MOBP (select a term)
intoGenMOBP
Cancer3DMOBP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600948   
Orphanet
MedgenMOBP
Genetic Testing Registry MOBP
NextProtQ13875 [Medical]
TSGene4336
GENETestsMOBP
Target ValidationMOBP
Huge Navigator MOBP [HugePedia]
snp3D : Map Gene to Disease4336
BioCentury BCIQMOBP
ClinGenMOBP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4336
Chemical/Pharm GKB GenePA30899
Clinical trialMOBP
Miscellaneous
canSAR (ICR)MOBP (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMOBP
EVEXMOBP
GoPubMedMOBP
iHOPMOBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:20:24 CEST 2017

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