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MRPL41 (mitochondrial ribosomal protein L41)

Identity

Alias_symbol (synonym)MRP-L27
RPML27
BMRP
PIG3
MRPL27
Other alias
HGNC (Hugo) MRPL41
LocusID (NCBI) 64975
Atlas_Id 46499
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 137551857 and ends at 137552555 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPL41   14492
Cards
Entrez_Gene (NCBI)MRPL41  64975  mitochondrial ribosomal protein L41
AliasesBMRP; MRP-L27; MRPL27; PIG3; 
RPML27
GeneCards (Weizmann)MRPL41
Ensembl hg19 (Hinxton)ENSG00000182154 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182154 [Gene_View]  chr9:137551857-137552555 [Contig_View]  MRPL41 [Vega]
ICGC DataPortalENSG00000182154
TCGA cBioPortalMRPL41
AceView (NCBI)MRPL41
Genatlas (Paris)MRPL41
WikiGenes64975
SOURCE (Princeton)MRPL41
Genetics Home Reference (NIH)MRPL41
Genomic and cartography
GoldenPath hg38 (UCSC)MRPL41  -     chr9:137551857-137552555 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPL41  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblMRPL41 - 9q34.3 [CytoView hg19]  MRPL41 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIMRPL41 [Mapview hg19]  MRPL41 [Mapview hg38]
OMIM611846   
Gene and transcription
Genbank (Entrez)AI091177 AY232291 BC040035 BM919526
RefSeq transcript (Entrez)NM_032477
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRPL41
Cluster EST : UnigeneHs.44017 [ NCBI ]
CGAP (NCI)Hs.44017
Alternative Splicing GalleryENSG00000182154
Gene ExpressionMRPL41 [ NCBI-GEO ]   MRPL41 [ EBI - ARRAY_EXPRESS ]   MRPL41 [ SEEK ]   MRPL41 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPL41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64975
GTEX Portal (Tissue expression)MRPL41
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IXM3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IXM3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IXM3
Splice isoforms : SwissVarQ8IXM3
PhosPhoSitePlusQ8IXM3
Domains : Interpro (EBI)Ribosomal_L27/L41_mit   
Domain families : Pfam (Sanger)MRP-L27 (PF09809)   
Domain families : Pfam (NCBI)pfam09809   
Conserved Domain (NCBI)MRPL41
DMDM Disease mutations64975
Blocks (Seattle)MRPL41
PDB (SRS)3J7Y    3J9M   
PDB (PDBSum)3J7Y    3J9M   
PDB (IMB)3J7Y    3J9M   
PDB (RSDB)3J7Y    3J9M   
Structural Biology KnowledgeBase3J7Y    3J9M   
SCOP (Structural Classification of Proteins)3J7Y    3J9M   
CATH (Classification of proteins structures)3J7Y    3J9M   
SuperfamilyQ8IXM3
Human Protein AtlasENSG00000182154
Peptide AtlasQ8IXM3
HPRD14760
IPIIPI00217553   
Protein Interaction databases
DIP (DOE-UCLA)Q8IXM3
IntAct (EBI)Q8IXM3
FunCoupENSG00000182154
BioGRIDMRPL41
STRING (EMBL)MRPL41
ZODIACMRPL41
Ontologies - Pathways
QuickGOQ8IXM3
Ontology : AmiGORNA binding  structural constituent of ribosome  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial large ribosomal subunit  translation  apoptotic process  cell cycle  intracellular ribonucleoprotein complex  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIRNA binding  structural constituent of ribosome  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial large ribosomal subunit  translation  apoptotic process  cell cycle  intracellular ribonucleoprotein complex  mitochondrial translational elongation  mitochondrial translational termination  
NDEx NetworkMRPL41
Atlas of Cancer Signalling NetworkMRPL41
Wikipedia pathwaysMRPL41
Orthology - Evolution
OrthoDB64975
GeneTree (enSembl)ENSG00000182154
Phylogenetic Trees/Animal Genes : TreeFamMRPL41
HOVERGENQ8IXM3
HOGENOMQ8IXM3
Homologs : HomoloGeneMRPL41
Homology/Alignments : Family Browser (UCSC)MRPL41
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPL41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPL41
dbVarMRPL41
ClinVarMRPL41
1000_GenomesMRPL41 
Exome Variant ServerMRPL41
ExAC (Exome Aggregation Consortium)MRPL41 (select the gene name)
Genetic variants : HAPMAP64975
Genomic Variants (DGV)MRPL41 [DGVbeta]
DECIPHERMRPL41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRPL41 
Mutations
ICGC Data PortalMRPL41 
TCGA Data PortalMRPL41 
Broad Tumor PortalMRPL41
OASIS PortalMRPL41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPL41  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPL41
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPL41
DgiDB (Drug Gene Interaction Database)MRPL41
DoCM (Curated mutations)MRPL41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPL41 (select a term)
intoGenMRPL41
Cancer3DMRPL41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611846   
Orphanet
MedgenMRPL41
Genetic Testing Registry MRPL41
NextProtQ8IXM3 [Medical]
TSGene64975
GENETestsMRPL41
Target ValidationMRPL41
Huge Navigator MRPL41 [HugePedia]
snp3D : Map Gene to Disease64975
BioCentury BCIQMRPL41
ClinGenMRPL41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64975
Chemical/Pharm GKB GenePA30973
Clinical trialMRPL41
Miscellaneous
canSAR (ICR)MRPL41 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPL41
EVEXMRPL41
GoPubMedMRPL41
iHOPMRPL41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 14:00:41 CEST 2017

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