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OSBPL7 (oxysterol binding protein like 7)

Identity

Alias_namesoxysterol binding protein-like 7
Alias_symbol (synonym)ORP7
MGC71150
Other alias
HGNC (Hugo) OSBPL7
LocusID (NCBI) 114881
Atlas_Id 52681
Location 17q21.32  [Link to chromosome band 17q21]
Location_base_pair Starts at 47807367 and ends at 47821781 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OSBPL7   16387
Cards
Entrez_Gene (NCBI)OSBPL7  114881  oxysterol binding protein like 7
AliasesORP7
GeneCards (Weizmann)OSBPL7
Ensembl hg19 (Hinxton)ENSG00000006025 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000006025 [Gene_View]  chr17:47807367-47821781 [Contig_View]  OSBPL7 [Vega]
ICGC DataPortalENSG00000006025
TCGA cBioPortalOSBPL7
AceView (NCBI)OSBPL7
Genatlas (Paris)OSBPL7
WikiGenes114881
SOURCE (Princeton)OSBPL7
Genetics Home Reference (NIH)OSBPL7
Genomic and cartography
GoldenPath hg38 (UCSC)OSBPL7  -     chr17:47807367-47821781 -  17q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OSBPL7  -     17q21.32   [Description]    (hg19-Feb_2009)
EnsemblOSBPL7 - 17q21.32 [CytoView hg19]  OSBPL7 - 17q21.32 [CytoView hg38]
Mapping of homologs : NCBIOSBPL7 [Mapview hg19]  OSBPL7 [Mapview hg38]
OMIM606735   
Gene and transcription
Genbank (Entrez)AB208886 AF323729 AF392446 AI955239 AK289523
RefSeq transcript (Entrez)NM_017731 NM_145798
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OSBPL7
Cluster EST : UnigeneHs.463320 [ NCBI ]
CGAP (NCI)Hs.463320
Alternative Splicing GalleryENSG00000006025
Gene ExpressionOSBPL7 [ NCBI-GEO ]   OSBPL7 [ EBI - ARRAY_EXPRESS ]   OSBPL7 [ SEEK ]   OSBPL7 [ MEM ]
Gene Expression Viewer (FireBrowse)OSBPL7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114881
GTEX Portal (Tissue expression)OSBPL7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZF2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZF2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZF2
Splice isoforms : SwissVarQ9BZF2
PhosPhoSitePlusQ9BZF2
Domaine pattern : Prosite (Expaxy)OSBP (PS01013)    PH_DOMAIN (PS50003)   
Domains : Interpro (EBI)Oxysterol-bd    Oxysterol-bd_CS    PH_dom-like    PH_domain   
Domain families : Pfam (Sanger)Oxysterol_BP (PF01237)   
Domain families : Pfam (NCBI)pfam01237   
Domain families : Smart (EMBL)PH (SM00233)  
Conserved Domain (NCBI)OSBPL7
DMDM Disease mutations114881
Blocks (Seattle)OSBPL7
SuperfamilyQ9BZF2
Human Protein AtlasENSG00000006025
Peptide AtlasQ9BZF2
HPRD09477
IPIIPI00001575   IPI00556432   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZF2
IntAct (EBI)Q9BZF2
FunCoupENSG00000006025
BioGRIDOSBPL7
STRING (EMBL)OSBPL7
ZODIACOSBPL7
Ontologies - Pathways
QuickGOQ9BZF2
Ontology : AmiGOprotein binding  autophagosome  endoplasmic reticulum membrane  cytosol  cytosol  plasma membrane  bile acid biosynthetic process  regulation of autophagy  sterol transporter activity  cholesterol binding  sterol transport  cellular response to cholesterol  perinuclear endoplasmic reticulum  positive regulation of proteasomal protein catabolic process  
Ontology : EGO-EBIprotein binding  autophagosome  endoplasmic reticulum membrane  cytosol  cytosol  plasma membrane  bile acid biosynthetic process  regulation of autophagy  sterol transporter activity  cholesterol binding  sterol transport  cellular response to cholesterol  perinuclear endoplasmic reticulum  positive regulation of proteasomal protein catabolic process  
NDEx NetworkOSBPL7
Atlas of Cancer Signalling NetworkOSBPL7
Wikipedia pathwaysOSBPL7
Orthology - Evolution
OrthoDB114881
GeneTree (enSembl)ENSG00000006025
Phylogenetic Trees/Animal Genes : TreeFamOSBPL7
HOVERGENQ9BZF2
HOGENOMQ9BZF2
Homologs : HomoloGeneOSBPL7
Homology/Alignments : Family Browser (UCSC)OSBPL7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOSBPL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OSBPL7
dbVarOSBPL7
ClinVarOSBPL7
1000_GenomesOSBPL7 
Exome Variant ServerOSBPL7
ExAC (Exome Aggregation Consortium)OSBPL7 (select the gene name)
Genetic variants : HAPMAP114881
Genomic Variants (DGV)OSBPL7 [DGVbeta]
DECIPHEROSBPL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOSBPL7 
Mutations
ICGC Data PortalOSBPL7 
TCGA Data PortalOSBPL7 
Broad Tumor PortalOSBPL7
OASIS PortalOSBPL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOSBPL7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOSBPL7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OSBPL7
DgiDB (Drug Gene Interaction Database)OSBPL7
DoCM (Curated mutations)OSBPL7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OSBPL7 (select a term)
intoGenOSBPL7
Cancer3DOSBPL7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606735   
Orphanet
MedgenOSBPL7
Genetic Testing Registry OSBPL7
NextProtQ9BZF2 [Medical]
TSGene114881
GENETestsOSBPL7
Huge Navigator OSBPL7 [HugePedia]
snp3D : Map Gene to Disease114881
BioCentury BCIQOSBPL7
ClinGenOSBPL7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114881
Chemical/Pharm GKB GenePA32831
Clinical trialOSBPL7
Miscellaneous
canSAR (ICR)OSBPL7 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOSBPL7
EVEXOSBPL7
GoPubMedOSBPL7
iHOPOSBPL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:29:49 CEST 2017

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