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PCMT1 (protein-L-isoaspartate (D-aspartate) O-methyltransferase)

Identity

Alias (NCBI)PIMT
HGNC (Hugo) PCMT1
LocusID (NCBI) 5110
Atlas_Id 41669
Location 6q25.1  [Link to chromosome band 6q25]
Location_base_pair Starts at 149749695 and ends at 149811421 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PCMT1 (6q25.1) / LATS1 (6q25.1)SPAG9 (17q21.33) / PCMT1 (6q25.1)SPAG9 17q21.33 / PCMT1 6q25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PCMT1   8728
Cards
Entrez_Gene (NCBI)PCMT1    protein-L-isoaspartate (D-aspartate) O-methyltransferase
AliasesPIMT
GeneCards (Weizmann)PCMT1
Ensembl hg19 (Hinxton)ENSG00000120265 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120265 [Gene_View]  ENSG00000120265 [Sequence]  chr6:149749695-149811421 [Contig_View]  PCMT1 [Vega]
ICGC DataPortalENSG00000120265
TCGA cBioPortalPCMT1
AceView (NCBI)PCMT1
Genatlas (Paris)PCMT1
SOURCE (Princeton)PCMT1
Genetics Home Reference (NIH)PCMT1
Genomic and cartography
GoldenPath hg38 (UCSC)PCMT1  -     chr6:149749695-149811421 +  6q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCMT1  -     6q25.1   [Description]    (hg19-Feb_2009)
GoldenPathPCMT1 - 6q25.1 [CytoView hg19]  PCMT1 - 6q25.1 [CytoView hg38]
ImmunoBaseENSG00000120265
Genome Data Viewer NCBIPCMT1 [Mapview hg19]  
OMIM176851   
Gene and transcription
Genbank (Entrez)AA442100 AI220702 AK098739 AK129778 AK289724
RefSeq transcript (Entrez)NM_001252049 NM_001252050 NM_001252051 NM_001252052 NM_001252053 NM_001360452 NM_001360456 NM_005389
Consensus coding sequences : CCDS (NCBI)PCMT1
Gene ExpressionPCMT1 [ NCBI-GEO ]   PCMT1 [ EBI - ARRAY_EXPRESS ]   PCMT1 [ SEEK ]   PCMT1 [ MEM ]
Gene Expression Viewer (FireBrowse)PCMT1 [ Firebrowse - Broad ]
GenevisibleExpression of PCMT1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5110
GTEX Portal (Tissue expression)PCMT1
Human Protein AtlasENSG00000120265-PCMT1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCMT1
Human Protein Atlas [tissue]ENSG00000120265-PCMT1 [tissue]
HPRD08908
Protein Interaction databases
BioGRIDPCMT1
STRING (EMBL)PCMT1
ZODIACPCMT1
Ontologies - Pathways
Litterature
PubMed128 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPCMT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:24:37 CEST 2021

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