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PGM1 (phosphoglucomutase 1)

Identity

Alias (NCBI)CDG1T
GSD14
HGNC (Hugo) PGM1
LocusID (NCBI) 5236
Atlas_Id 47415
Location 1p31.3  [Link to chromosome band 1p31]
Location_base_pair Starts at 63593411 and ends at 63660245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PGM1 (1p31.3) / CPSF2 (14q32.12)PGM1 (1p31.3) / PGM1 (1p31.3)XG (Xp22.33) / PGM1 (1p31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PGM1   8905
Cards
Entrez_Gene (NCBI)PGM1    phosphoglucomutase 1
AliasesCDG1T; GSD14
GeneCards (Weizmann)PGM1
Ensembl hg19 (Hinxton)ENSG00000079739 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000079739 [Gene_View]  ENSG00000079739 [Sequence]  chr1:63593411-63660245 [Contig_View]  PGM1 [Vega]
ICGC DataPortalENSG00000079739
TCGA cBioPortalPGM1
AceView (NCBI)PGM1
Genatlas (Paris)PGM1
SOURCE (Princeton)PGM1
Genetics Home Reference (NIH)PGM1
Genomic and cartography
GoldenPath hg38 (UCSC)PGM1  -     chr1:63593411-63660245 +  1p31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PGM1  -     1p31.3   [Description]    (hg19-Feb_2009)
GoldenPathPGM1 - 1p31.3 [CytoView hg19]  PGM1 - 1p31.3 [CytoView hg38]
ImmunoBaseENSG00000079739
Genome Data Viewer NCBIPGM1 [Mapview hg19]  
OMIM171900   614921   
Gene and transcription
Genbank (Entrez)AK293298 AK294186 AK298505 AK300100 AK312254
RefSeq transcript (Entrez)NM_001172818 NM_001172819 NM_002633
Consensus coding sequences : CCDS (NCBI)PGM1
Gene ExpressionPGM1 [ NCBI-GEO ]   PGM1 [ EBI - ARRAY_EXPRESS ]   PGM1 [ SEEK ]   PGM1 [ MEM ]
Gene Expression Viewer (FireBrowse)PGM1 [ Firebrowse - Broad ]
GenevisibleExpression of PGM1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5236
GTEX Portal (Tissue expression)PGM1
Human Protein AtlasENSG00000079739-PGM1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PGM1
Human Protein Atlas [tissue]ENSG00000079739-PGM1 [tissue]
HPRD01389
Protein Interaction databases
BioGRIDPGM1
STRING (EMBL)PGM1
ZODIACPGM1
Ontologies - Pathways
Litterature
PubMed73 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPGM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:25:03 CEST 2021

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