Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

POLN (polymerase (DNA directed) nu)

Identity

Other namesPOL4P
HGNC (Hugo) POLN
LocusID (NCBI) 353497
Location 4p16.3
Location_base_pair Starts at 2073645 and ends at 2230958 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)POLN   18870
Entrez_Gene (NCBI)POLN  353497  polymerase (DNA directed) nu
Cards
GeneCards (Weizmann)POLN
Ensembl (Hinxton)ENSG00000130997 [Gene_View]  chr4:2073645-2230958 [Contig_View]  POLN [Vega]
AceView (NCBI)POLN
Genatlas (Paris)POLN
SOURCE (Stanford)NM_181808
Genomic and cartography
GoldenPath (UCSC)POLN  -  4p16.3   chr4:2073645-2230958 -  4p16.3   [Description]    (hg19-Feb_2009)
EnsemblPOLN - 4p16.3 [CytoView]
Mapping of homologs : NCBIPOLN [Mapview]
OMIM610887   
Gene and transcription
Genbank (Entrez)AF044578 AK131239 AK303673 AL122048 AY136549
RefSeq transcript (SRS)NM_181808
RefSeq transcript (Entrez)NM_181808
RefSeq genomic (SRS)AC_000136 NC_000004 NC_018915 NT_006051 NW_001838896 NW_004078016
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NT_006051 NW_001838896 NW_004078016
Consensus coding sequences : CCDS (NCBI)POLN
Cluster EST : UnigeneHs.368454 [ SRS ] Hs.368454 [ NCBI ]
CGAP (NCI)Hs.368454
Alternative Splicing : Fast-db (Paris)GSHG0023076
Alternative Splicing GalleryENSG00000130997
Gene ExpressionPOLN [ NCBI-GEO ]   POLN [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z5Q5 (SRS) Q7Z5Q5 (Uniprot)
NextProtQ7Z5Q5
With graphics : InterProQ7Z5Q5
Splice isoforms : SwissVarQ7Z5Q5(Swissvar)
Domaine pattern : Prosite (SRS)DNA_POLYMERASE_A (PS00447)   
Domaine pattern : Prosite (Expaxy)DNA_POLYMERASE_A (PS00447)   
Domains : Interpro (SRS)DNA-dir_DNA_pol_A_palm_dom    DNA_polymerase_A   
Domains : Interpro (EBI)DNA-dir_DNA_pol_A_palm_dom    DNA_polymerase_A   
Related proteins : CluSTrQ7Z5Q5
Domain families : Pfam (SRS)DNA_pol_A (PF00476)   
Domain families : Pfam (Sanger)DNA_pol_A (PF00476)   
Domain families : Pfam (NCBI)pfam00476   
Domain families : Smart (EMBL)POLAc (SM00482)  
DMDM353497
Blocks (Seattle)Q7Z5Q5
Human Protein AtlasENSG00000130997
HPRD17876
IPIIPI00385298   IPI00909016   IPI00969018   IPI00028880   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z5Q5
IntAct (EBI)Q7Z5Q5
FunCoupENSG00000130997
REACTOMEPOLN
Protein Interaction Database353497
BioGRIDPOLN
InParanoidQ7Z5Q5
Interologous Interaction database Q7Z5Q5
IntegromeDBPOLN
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)POLN
SNP (GeneSNP Utah)POLN
SNP : HGBasePOLN
Genetic variants : HAPMAPPOLN
Somatic Mutations in Cancer : COSMICPOLN 
CONAN: Copy Number AnalysisPOLN 
Mutations and Diseases : HGMDPOLN
OMIM610887   
GENETests610887   
Disease Genetic AssociationPOLN
Huge Navigator POLN [HugePedia]  POLN [HugeCancerGEM]
Genomic VariantsPOLN  POLN [DGVbeta]
ClinVarPOLN
snp3D : Map Gene to Disease353497
General knowledge
Homologs : HomoloGenePOLN
Homology/Alignments : Family Browser (UCSC)POLN
Phylogenetic Trees/Animal Genes : TreeFamPOLN
Chemical/Protein Interactions : CTD353497
Chemical/Pharm GKB GenePA134979866
Clinical trialPOLN
Cancer Resource (Charite)ENSG00000130997
Ontology : AmiGODNA binding  DNA-directed DNA polymerase activity  nucleus  DNA replication  DNA repair  
Ontology : EGO-EBIDNA binding  DNA-directed DNA polymerase activity  nucleus  DNA replication  DNA repair  
Other databases
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
PubGenePOLN
iHOPPOLN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:30:20 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.