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QKI (quaking homolog, KH domain RNA binding (mouse))

Identity

Other namesDKFZp586I0923
Hqk
QK
QK1
QK3
HGNC (Hugo) QKI
Location 6q26
Location_base_pair Starts at 163755665 and ends at 163914884 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)QKI   21100
Entrez_Gene (NCBI)QKI  9444  quaking homolog, KH domain RNA binding (mouse)
Cards
GeneCards (Weizmann)QKI
Ensembl (Hinxton)ENSG00000112531 [Gene_View]  QKI [Vega]
AceView (NCBI)QKI
Genatlas (Paris)QKI
euGene (Indiana)9444
SOURCE (Stanford)NM_006775 NM_206853 NM_206854 NM_206855
Gene Expression (Array Express) ENSG00000112531
Genomic and cartography
GoldenPath (UCSC)QKI  -  6q26   chr6:163755665-163914884 +  6q26   [Description]    (hg18-March_2006)
EnsemblQKI - 6q26 [CytoView]
Mapping of homologs : NCBIQKI [Mapview]
OMIM609590   
Gene and transcription
Gene : Genbank (Entrez)AB067798 AB067799 AB067800 AB067801 AF142418
Reference sequence (RefSeq transcript) :SRSNM_006775 NM_206853 NM_206854 NM_206855
Reference transcript : EntrezNM_006775 NM_206853 NM_206854 NM_206855
RefSeq genomic : SRSAC_000049 AC_000138 NC_000006 NT_025741 NW_001838992 NW_923184
RefSeq genomic : EntrezAC_000049 AC_000138 NC_000006 NT_025741 NW_001838992 NW_923184
Consensus coding sequences : CCDS NCBIQKI
Cluster EST : UnigeneHs.593520 [ SRS ] Hs.593520 [ NCBI ]
Alternative Splicing : Fast-db (Paris)16998
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ96PU8 (SRS) Q96PU8 (Expasy) Q96PU8 (Uniprot)
With graphics : InterProQ96PU8
Splice isoforms : VarSplice FASTAQ96PU8(VarSplice FASTA)
Domaine pattern : Prosite (SRS)KH_TYPE_1 (PS50084)   
Domain pattern : Prosite (Expaxy)KH_TYPE_1 (PS50084)   
Domains : Interpro (SRS)KH    KH_type_1_subgr   
Domains : Interpro (EBI)KH    KH_type_1_subgr   
Related proteins : CluSTrQ96PU8
Domain families : Pfam SRSKH_1 (PF00013)   
Domain families : Pfam SangerKH_1 (PF00013)   
Domain families : Pfam NCBIpfam00013   
Domain families : Smart EMBLKH (SM00322)  
Blocks (Seattle)Q96PU8
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD06691
Protein Interaction databases
DIP (DOE-UCLA)Q96PU8
IntAct (EBI)Q96PU8
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIQKI
SNP : GeneSNP UtahQKI
SNP : HGBaseQKI
Genetic variants : HAPMAPQKI
Somatic Mutations in Cancer : COSMICQKI 
Mutations and Diseases : HGMDQKI
Hereditary diseases : OMIM609590   
Hereditary diseases : GENETests609590   
Diseases : Genetic AssociationQKI
General knowledge
Homologs : HomoloGeneQKI
Homology/Alignments : Family Browser UCSCQKI
Phylogenetic Trees/Animal Genes : TreeFamQKI
Chemical/Protein Interactions : CTD9444
Keywords Ontology : AmiGOvasculogenesis  RNA binding  protein binding  nucleus  nucleolus  cytoplasm  plasma membrane  mRNA processing  regulation of translation  transport  multicellular organismal development  spermatogenesis  RNA splicing  SH3 domain binding  myelination  muscle cell differentiation  long-chain fatty acid biosynthetic process  mRNA transport  
Keywords Ontology : EGO-EBIvasculogenesis  RNA binding  protein binding  nucleus  nucleolus  cytoplasm  plasma membrane  mRNA processing  regulation of translation  transport  multicellular organismal development  spermatogenesis  RNA splicing  SH3 domain binding  myelination  muscle cell differentiation  long-chain fatty acid biosynthetic process  mRNA transport  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesQKI Related clones (RZPD - Berlin)
Literature
PubMed24 Pubmed reference(s) in Entrez
PubGeneQKI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 6 13:27:57 CET 2010
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