Atlas of Genetics and Cytogenetics in Oncology and Haematology

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RRAS (related RAS viral (r-ras) oncogene homolog)

Identity

Other names-
HGNC (Hugo) RRAS
LocusID (NCBI) 6237
Location 19q13.33
Location_base_pair Starts at 50138552 and ends at 50143400 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RRAS   10447
Entrez_Gene (NCBI)RRAS  6237  related RAS viral (r-ras) oncogene homolog
Cards
GeneCards (Weizmann)RRAS
Ensembl (Hinxton)ENSG00000126458 [Gene_View]  chr19:50138552-50143400 [Contig_View]  RRAS [Vega]
AceView (NCBI)RRAS
Genatlas (Paris)RRAS
SOURCE (Stanford)NM_006270
Genomic and cartography
GoldenPath (UCSC)RRAS  -  19q13.33   chr19:50138552-50143400 -  19q13.33   [Description]    (hg19-Feb_2009)
EnsemblRRAS - 19q13.33 [CytoView]
Mapping of homologs : NCBIRRAS [Mapview]
OMIM165090   
Gene and transcription
Genbank (Entrez)AF493920 BC016286 BC016318 BT006805 CR541944
RefSeq transcript (SRS)NM_006270
RefSeq transcript (Entrez)NM_006270
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838497 NW_004078099
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838497 NW_004078099
Consensus coding sequences : CCDS (NCBI)RRAS
Cluster EST : UnigeneHs.515536 [ SRS ] Hs.515536 [ NCBI ]
CGAP (NCI)Hs.515536
Alternative Splicing : Fast-db (Paris)GSHG0016004
Alternative Splicing GalleryENSG00000126458
Gene ExpressionRRAS [ NCBI-GEO ]   RRAS [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP10301 (SRS) P10301 (Uniprot)
NextProtP10301
With graphics : InterProP10301
Splice isoforms : SwissVarP10301(Swissvar)
Domaine pattern : Prosite (SRS)RAS (PS51421)   
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (SRS)Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras   
Domains : Interpro (EBI)Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras   
Related proteins : CluSTrP10301
Domain families : Pfam (SRS)Ras (PF00071)   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Domain families : Smart (EMBL)RAS (SM00173)  
DMDM6237
Blocks (Seattle)P10301
PDB (SRS)2FN4   
PDB (PDBSum)2FN4   
PDB (IMB)2FN4   
PDB (RSDB)2FN4   
Human Protein AtlasENSG00000126458
HPRD01299
IPIIPI00020418   
Protein Interaction databases
DIP (DOE-UCLA)P10301
IntAct (EBI)P10301
FunCoupENSG00000126458
REACTOMERRAS
Protein Interaction Database6237
BioGRIDRRAS
InParanoidP10301
Interologous Interaction database P10301
IntegromeDBRRAS
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RRAS
SNP (GeneSNP Utah)RRAS
SNP : HGBaseRRAS
Genetic variants : HAPMAPRRAS
Somatic Mutations in Cancer : COSMICRRAS 
CONAN: Copy Number AnalysisRRAS 
Mutations and Diseases : HGMDRRAS
OMIM165090   
GENETests165090   
Disease Genetic AssociationRRAS
Huge Navigator RRAS [HugePedia]  RRAS [HugeCancerGEM]
Genomic VariantsRRAS  RRAS [DGVbeta]
ClinVarRRAS
snp3D : Map Gene to Disease6237
General knowledge
Homologs : HomoloGeneRRAS
Homology/Alignments : Family Browser (UCSC)RRAS
Phylogenetic Trees/Animal Genes : TreeFamRRAS
Chemical/Protein Interactions : CTD6237
Chemical/Pharm GKB GenePA34861
Clinical trialRRAS
Cancer Resource (Charite)ENSG00000126458
Ontology : AmiGOGTPase activity  protein binding  GTP binding  plasma membrane  Ras protein signal transduction  synaptic transmission  axon guidance  GDP binding  negative regulation of cell migration  positive regulation of angiogenesis  
Ontology : EGO-EBIGTPase activity  protein binding  GTP binding  plasma membrane  Ras protein signal transduction  synaptic transmission  axon guidance  GDP binding  negative regulation of cell migration  positive regulation of angiogenesis  
Pathways : KEGGRegulation of actin cytoskeletonAxon guidanceMAPK signaling pathwayTight junction
Other databases
Probes
Litterature
PubMed49 Pubmed reference(s) in Entrez
PubGeneRRAS
iHOPRRAS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:47:13 CEST 2013
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