Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RRAS (related RAS viral (r-ras) oncogene homolog)

Identity

Other names-
HGNC (Hugo) RRAS
LocusID (NCBI) 6237
Location 19q13.33
Location_base_pair Starts at 50138552 and ends at 50143400 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RRAS   10447
Cards
Entrez_Gene (NCBI)RRAS  6237  related RAS viral (r-ras) oncogene homolog
GeneCards (Weizmann)RRAS
Ensembl (Hinxton)ENSG00000126458 [Gene_View]  chr19:50138552-50143400 [Contig_View]  RRAS [Vega]
AceView (NCBI)RRAS
Genatlas (Paris)RRAS
WikiGenes6237
SOURCE (Princeton)NM_006270
Genomic and cartography
GoldenPath (UCSC)RRAS  -  19q13.33   chr19:50138552-50143400 -  19q13.33   [Description]    (hg19-Feb_2009)
EnsemblRRAS - 19q13.33 [CytoView]
Mapping of homologs : NCBIRRAS [Mapview]
OMIM165090   
Gene and transcription
Genbank (Entrez)AF493920 BC016286 BC016318 BT006805 CR541944
RefSeq transcript (Entrez)NM_006270
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011109 NW_001838497 NW_004929415
Consensus coding sequences : CCDS (NCBI)RRAS
Cluster EST : UnigeneHs.515536 [ NCBI ]
CGAP (NCI)Hs.515536
Alternative Splicing : Fast-db (Paris)GSHG0016004
Alternative Splicing GalleryENSG00000126458
Gene ExpressionRRAS [ NCBI-GEO ]     RRAS [ SEEK ]   RRAS [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP10301 (Uniprot)
NextProtP10301  [Medical]
With graphics : InterProP10301
Splice isoforms : SwissVarP10301 (Swissvar)
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_Ras   
Related proteins : CluSTrP10301
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Domain families : Smart (EMBL)RAS (SM00173)  
DMDM Disease mutations6237
Blocks (Seattle)P10301
PDB (SRS)2FN4   
PDB (PDBSum)2FN4   
PDB (IMB)2FN4   
PDB (RSDB)2FN4   
Human Protein AtlasENSG00000126458
Peptide AtlasP10301
HPRD01299
IPIIPI00020418   
Protein Interaction databases
DIP (DOE-UCLA)P10301
IntAct (EBI)P10301
FunCoupENSG00000126458
BioGRIDRRAS
InParanoidP10301
Interologous Interaction database P10301
IntegromeDBRRAS
STRING (EMBL)RRAS
Ontologies - Pathways
Ontology : AmiGOGTPase activity  protein binding  GTP binding  plasma membrane  Ras protein signal transduction  synaptic transmission  axon guidance  GDP binding  negative regulation of cell migration  positive regulation of angiogenesis  
Ontology : EGO-EBIGTPase activity  protein binding  GTP binding  plasma membrane  Ras protein signal transduction  synaptic transmission  axon guidance  GDP binding  negative regulation of cell migration  positive regulation of angiogenesis  
Pathways : KEGGMAPK signaling pathway    Ras signaling pathway    Rap1 signaling pathway    Tight junction    Regulation of actin cytoskeleton    HTLV-I infection    Proteoglycans in cancer   
REACTOMERRAS
Protein Interaction DatabaseRRAS
Wikipedia pathwaysRRAS
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RRAS
SNP (GeneSNP Utah)RRAS
SNP : HGBaseRRAS
Genetic variants : HAPMAPRRAS
1000_GenomesRRAS 
ICGC programENSG00000126458 
Somatic Mutations in Cancer : COSMICRRAS 
CONAN: Copy Number AnalysisRRAS 
Mutations and Diseases : HGMDRRAS
OMIM165090   
GENETestsRRAS
Disease Genetic AssociationRRAS
Huge Navigator RRAS [HugePedia]  RRAS [HugeCancerGEM]
Genomic VariantsRRAS  RRAS [DGVbeta]
Exome VariantRRAS
dbVarRRAS
ClinVarRRAS
snp3D : Map Gene to Disease6237
General knowledge
Homologs : HomoloGeneRRAS
Homology/Alignments : Family Browser (UCSC)RRAS
Phylogenetic Trees/Animal Genes : TreeFamRRAS
Chemical/Protein Interactions : CTD6237
Chemical/Pharm GKB GenePA34861
Clinical trialRRAS
Cancer Resource (Charite)ENSG00000126458
Other databases
Probes
Litterature
PubMed50 Pubmed reference(s) in Entrez
CoreMineRRAS
iHOPRRAS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 17:04:03 CEST 2014

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