SIGLEC9 (sialic acid binding Ig-like lectin 9)

Identity

Other names	CD329
	CDw329
	OBBP-LIKE
HGNC	SIGLEC9
Location	19q13.3-q13.4
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SIGLEC9   10878
Entrez_Gene	SIGLEC9  27180  sialic acid binding Ig-like lectin 9
	Cards
GeneCards	SIGLEC9
Ensembl	SIGLEC9 [Search_View]   ENSG00000129450 [Gene_View]
Genatlas	SIGLEC9
GeneLynx	SIGLEC9
eGenome	SIGLEC9
euGene	27180
	Genomic and cartography
GoldenPath	SIGLEC9  -     chr19:56319977-56325379 +  19q13.33   [Description]    (hg18-March_2006)
Ensembl	SIGLEC9 - 19q13.33 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SIGLEC9
	Gene and transcription
Genbank	AB026265 [ ENTREZ ]
Genbank	AF227924 [ ENTREZ ]
Genbank	AF247180 [ ENTREZ ]
Genbank	AK297043 [ ENTREZ ]
Genbank	AK315272 [ ENTREZ ]
RefSeq	NM_014441 [ SRS ]    NM_014441 [ ENTREZ ]
RefSeq	AC_000062 [ SRS ]    AC_000062 [ ENTREZ ]
RefSeq	AC_000151 [ SRS ]    AC_000151 [ ENTREZ ]
RefSeq	NC_000019 [ SRS ]    NC_000019 [ ENTREZ ]
RefSeq	NT_011109 [ SRS ]    NT_011109 [ ENTREZ ]
RefSeq	NW_001838498 [ SRS ]    NW_001838498 [ ENTREZ ]
RefSeq	NW_927284 [ SRS ]    NW_927284 [ ENTREZ ]
AceView	SIGLEC9 AceView - NCBI
Unigene	Hs.245828 [ SRS ]    Hs.245828 [ NCBI ]     HS245828 [ spliceNest ]
Fast-db	14783 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6GTU4 [ SRS]    Q6GTU4 [ EXPASY ]     Q6GTU4 [ INTERPRO ]     Q6GTU4 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR013162 CD80_C2-set [ SRS ]    IPR013162 CD80_C2-set [ EBI ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
CluSTr	Q6GTU4
Pfam	PF08205 C2-set_2 [ SRS ]    PF08205 C2-set_2 [ Sanger ]    pfam08205 [ NCBI-CDD ]
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Blocks	Q6GTU4
HPRD	16133
	Protein Interaction databases
DIP	Q6GTU4
IntAct	Q6GTU4
	Polymorphism : SNP, mutations, diseases
OMIM	605640    [ map ]
GENECLINICS	605640
SNP	SIGLEC9 [dbSNP-NCBI]
SNP	NM_014441 [SNP-NCI]
SNP	SIGLEC9 [GeneSNPs - Utah]  SIGLEC9] [HGBASE - SRS]
HAPMAP	SIGLEC9 [HAPMAP]
HGMD	SIGLEC9
	General knowledge
Family Browser	SIGLEC9 [UCSC Family Browser]
SOURCE	NM_014441
SMD	Hs.245828
SAGE	Hs.245828
GO	protein binding [Amigo]  protein binding
GO	sugar binding [Amigo]  sugar binding
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	cell surface receptor linked signal transduction [Amigo]  cell surface receptor linked signal transduction
GO	membrane [Amigo]  membrane
PubGene	SIGLEC9
TreeFam	SIGLEC9
CTD	27180 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SIGLEC9 Related clones (RZPD - Berlin)
	PubMed
PubMed	14 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Sep 29 18:22:04 2008