Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SULT1A1 (sulfotransferase family 1A member 1)

Identity

Alias (NCBI)HAST1/HAST2
P-PST
P-PST 1
PST
ST1A1
ST1A3
STP
STP1
TSPST1
ts-PST
HGNC (Hugo) SULT1A1
HGNC Alias symbP-PST
HGNC Previous nameSTP
 STP1
HGNC Previous namesulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
LocusID (NCBI) 6817
Atlas_Id 42449
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 28605587 and ends at 28623586 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)SULT1A1   11453
Cards
Entrez_Gene (NCBI)SULT1A1    sulfotransferase family 1A member 1
AliasesHAST1/HAST2; P-PST; P-PST; PST; 
ST1A1; ST1A3; STP; STP1; TSPST1; ts-PST
GeneCards (Weizmann)SULT1A1
Ensembl hg19 (Hinxton)ENSG00000196502 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196502 [Gene_View]  ENSG00000196502 [Sequence]  chr16:28605587-28623586 [Contig_View]  SULT1A1 [Vega]
ICGC DataPortalENSG00000196502
TCGA cBioPortalSULT1A1
AceView (NCBI)SULT1A1
Genatlas (Paris)SULT1A1
SOURCE (Princeton)SULT1A1
Genetics Home Reference (NIH)SULT1A1
Genomic and cartography
GoldenPath hg38 (UCSC)SULT1A1  -     chr16:28605587-28623586 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SULT1A1  -     16p11.2   [Description]    (hg19-Feb_2009)
GoldenPathSULT1A1 - 16p11.2 [CytoView hg19]  SULT1A1 - 16p11.2 [CytoView hg38]
ImmunoBaseENSG00000196502
Genome Data Viewer NCBISULT1A1 [Mapview hg19]  
OMIM171150   
Gene and transcription
Genbank (Entrez)AB062428 AB209149 AJ007418 AL558375 BC000923
RefSeq transcript (Entrez)NM_001055 NM_001394421 NM_001394422 NM_001394423 NM_001394424 NM_001394425 NM_177529 NM_177530 NM_177534 NM_177536
Consensus coding sequences : CCDS (NCBI)SULT1A1
Gene ExpressionSULT1A1 [ NCBI-GEO ]   SULT1A1 [ EBI - ARRAY_EXPRESS ]   SULT1A1 [ SEEK ]   SULT1A1 [ MEM ]
Gene Expression Viewer (FireBrowse)SULT1A1 [ Firebrowse - Broad ]
GenevisibleExpression of SULT1A1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6817
GTEX Portal (Tissue expression)SULT1A1
Human Protein AtlasENSG00000196502-SULT1A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50225   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP50225  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP50225
PhosPhoSitePlusP50225
Domains : Interpro (EBI)P-loop_NTPase    Sulfotransferase_dom   
Domain families : Pfam (Sanger)Sulfotransfer_1 (PF00685)   
Domain families : Pfam (NCBI)pfam00685   
Conserved Domain (NCBI)SULT1A1
PDB (RSDB)1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
PDB Europe1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
PDB (PDBSum)1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
PDB (IMB)1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
Structural Biology KnowledgeBase1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
SCOP (Structural Classification of Proteins)1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
CATH (Classification of proteins structures)1LS6    1Z28    2D06    3QVU    3QVV    3U3J    3U3K    3U3M    3U3O    3U3R    4GRA   
SuperfamilyP50225
AlphaFold pdb e-kbP50225   
Human Protein Atlas [tissue]ENSG00000196502-SULT1A1 [tissue]
HPRD01372
Protein Interaction databases
DIP (DOE-UCLA)P50225
IntAct (EBI)P50225
BioGRIDSULT1A1
STRING (EMBL)SULT1A1
ZODIACSULT1A1
Ontologies - Pathways
QuickGOP50225
Ontology : AmiGOaryl sulfotransferase activity  aryl sulfotransferase activity  protein binding  cytoplasm  cytosol  cytosol  ethanol catabolic process  catecholamine metabolic process  xenobiotic metabolic process  sulfotransferase activity  sulfotransferase activity  estrogen metabolic process  amine metabolic process  flavonoid metabolic process  flavonol 3-sulfotransferase activity  steroid sulfotransferase activity  3'-phosphoadenosine 5'-phosphosulfate metabolic process  3'-phosphoadenosine 5'-phosphosulfate metabolic process  3'-phosphoadenosine 5'-phosphosulfate binding  sulfation  sulfation  sulfation  
Ontology : EGO-EBIaryl sulfotransferase activity  aryl sulfotransferase activity  protein binding  cytoplasm  cytosol  cytosol  ethanol catabolic process  catecholamine metabolic process  xenobiotic metabolic process  sulfotransferase activity  sulfotransferase activity  estrogen metabolic process  amine metabolic process  flavonoid metabolic process  flavonol 3-sulfotransferase activity  steroid sulfotransferase activity  3'-phosphoadenosine 5'-phosphosulfate metabolic process  3'-phosphoadenosine 5'-phosphosulfate metabolic process  3'-phosphoadenosine 5'-phosphosulfate binding  sulfation  sulfation  sulfation  
Pathways : KEGGChemical carcinogenesis   
NDEx NetworkSULT1A1
Atlas of Cancer Signalling NetworkSULT1A1
Wikipedia pathwaysSULT1A1
Orthology - Evolution
OrthoDB6817
GeneTree (enSembl)ENSG00000196502
Phylogenetic Trees/Animal Genes : TreeFamSULT1A1
Homologs : HomoloGeneSULT1A1
Homology/Alignments : Family Browser (UCSC)SULT1A1
Gene fusions - Rearrangements
Fusion : QuiverSULT1A1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSULT1A1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SULT1A1
dbVarSULT1A1
ClinVarSULT1A1
MonarchSULT1A1
1000_GenomesSULT1A1 
Exome Variant ServerSULT1A1
GNOMAD BrowserENSG00000196502
Varsome BrowserSULT1A1
ACMGSULT1A1 variants
VarityP50225
Genomic Variants (DGV)SULT1A1 [DGVbeta]
DECIPHERSULT1A1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSULT1A1 
Mutations
ICGC Data PortalSULT1A1 
TCGA Data PortalSULT1A1 
Broad Tumor PortalSULT1A1
OASIS PortalSULT1A1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSULT1A1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DSULT1A1
Mutations and Diseases : HGMDSULT1A1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaSULT1A1
DgiDB (Drug Gene Interaction Database)SULT1A1
DoCM (Curated mutations)SULT1A1
CIViC (Clinical Interpretations of Variants in Cancer)SULT1A1
Cancer3DSULT1A1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM171150   
Orphanet
DisGeNETSULT1A1
MedgenSULT1A1
Genetic Testing Registry SULT1A1
NextProtP50225 [Medical]
GENETestsSULT1A1
Target ValidationSULT1A1
Huge Navigator SULT1A1 [HugePedia]
ClinGenSULT1A1
Clinical trials, drugs, therapy
MyCancerGenomeSULT1A1
Protein Interactions : CTDSULT1A1
Pharm GKB GenePA343
Pharm GKB PathwaysPA145011117   PA145011118   PA145011119   PA165986279   PA166117881   
PharosP50225
Clinical trialSULT1A1
Miscellaneous
canSAR (ICR)SULT1A1
HarmonizomeSULT1A1
DataMed IndexSULT1A1
Probes
Litterature
PubMed235 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSULT1A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:33:49 CEST 2021

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