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TLR4 (toll like receptor 4)

Identity

Alias (NCBI)ARMD10
CD284
TLR-4
TOLL
HGNC (Hugo) TLR4
HGNC Alias symbhToll
CD284
TLR-4
ARMD10
HGNC Previous nametoll-like receptor 4
LocusID (NCBI) 7099
Atlas_Id 46368
Location 9q33.1  [Link to chromosome band 9q33]
Location_base_pair Starts at 117704403 and ends at 117724735 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(11;19)(q23;p13) KMT2A/MYO1F


External links

Nomenclature
HGNC (Hugo)TLR4   11850
Cards
Entrez_Gene (NCBI)TLR4    toll like receptor 4
AliasesARMD10; CD284; TLR-4; TOLL
GeneCards (Weizmann)TLR4
Ensembl hg19 (Hinxton)ENSG00000136869 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136869 [Gene_View]  ENSG00000136869 [Sequence]  chr9:117704403-117724735 [Contig_View]  TLR4 [Vega]
ICGC DataPortalENSG00000136869
TCGA cBioPortalTLR4
AceView (NCBI)TLR4
Genatlas (Paris)TLR4
SOURCE (Princeton)TLR4
Genetics Home Reference (NIH)TLR4
Genomic and cartography
GoldenPath hg38 (UCSC)TLR4  -     chr9:117704403-117724735 +  9q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TLR4  -     9q33.1   [Description]    (hg19-Feb_2009)
GoldenPathTLR4 - 9q33.1 [CytoView hg19]  TLR4 - 9q33.1 [CytoView hg38]
ImmunoBaseENSG00000136869
genome Data Viewer NCBITLR4 [Mapview hg19]  
OMIM603030   
Gene and transcription
Genbank (Entrez)AA598398 AB445638 AK226155 AK290053 AK293068
RefSeq transcript (Entrez)NM_003266 NM_138554 NM_138556 NM_138557
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TLR4
Alternative Splicing GalleryENSG00000136869
Gene ExpressionTLR4 [ NCBI-GEO ]   TLR4 [ EBI - ARRAY_EXPRESS ]   TLR4 [ SEEK ]   TLR4 [ MEM ]
Gene Expression Viewer (FireBrowse)TLR4 [ Firebrowse - Broad ]
GenevisibleExpression of TLR4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7099
GTEX Portal (Tissue expression)TLR4
Human Protein AtlasENSG00000136869-TLR4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TLR4
Blocks (Seattle)TLR4
Human Protein Atlas [tissue]ENSG00000136869-TLR4 [tissue]
HPRD04325
IPIIPI00008673   IPI00374265   IPI00914904   IPI00954813   IPI00969398   
Protein Interaction databases
BioGRIDTLR4
STRING (EMBL)TLR4
ZODIACTLR4
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTLR4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:49:46 CET 2021

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