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TNFRSF10D (tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain)

Identity

Other namesCD264
DCR2
TRAIL-R4
TRAILR4
TRUNDD
HGNC (Hugo) TNFRSF10D
LocusID (NCBI) 8793
Location 8p21.3
Location_base_pair Starts at 22993101 and ends at 23021543 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TNFRSF10D   11907
Cards
Entrez_Gene (NCBI)TNFRSF10D  8793  tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain
GeneCards (Weizmann)TNFRSF10D
Ensembl (Hinxton)ENSG00000173530 [Gene_View]  chr8:22993101-23021543 [Contig_View]  TNFRSF10D [Vega]
ICGC DataPortalENSG00000173530
cBioPortalTNFRSF10D
AceView (NCBI)TNFRSF10D
Genatlas (Paris)TNFRSF10D
WikiGenes8793
SOURCE (Princeton)NM_003840
Genomic and cartography
GoldenPath (UCSC)TNFRSF10D  -  8p21.3   chr8:22993101-23021543 -  8p21.3   [Description]    (hg19-Feb_2009)
EnsemblTNFRSF10D - 8p21.3 [CytoView]
Mapping of homologs : NCBITNFRSF10D [Mapview]
OMIM603614   
Gene and transcription
Genbank (Entrez)AA743393 AF021232 AF021233 AF023849 AF029761
RefSeq transcript (Entrez)NM_003840
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NG_032579 NT_167187 NW_001839127 NW_004929337
Consensus coding sequences : CCDS (NCBI)TNFRSF10D
Cluster EST : UnigeneHs.213467 [ NCBI ]
CGAP (NCI)Hs.213467
Alternative Splicing : Fast-db (Paris)GSHG0029465
Alternative Splicing GalleryENSG00000173530
Gene ExpressionTNFRSF10D [ NCBI-GEO ]     TNFRSF10D [ SEEK ]   TNFRSF10D [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBN6 (Uniprot)
NextProtQ9UBN6  [Medical]
With graphics : InterProQ9UBN6
Splice isoforms : SwissVarQ9UBN6 (Swissvar)
Domaine pattern : Prosite (Expaxy)TNFR_NGFR_1 (PS00652)    TNFR_NGFR_2 (PS50050)   
Domains : Interpro (EBI)TNFR/NGFR_Cys_rich_reg [organisation]   TNFR_10 [organisation]  
Related proteins : CluSTrQ9UBN6
Domain families : Pfam (Sanger)TNFR_c6 (PF00020)   
Domain families : Pfam (NCBI)pfam00020   
Domain families : Smart (EMBL)TNFR (SM00208)  
DMDM Disease mutations8793
Blocks (Seattle)Q9UBN6
Human Protein AtlasENSG00000173530 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9UBN6
HPRD04682
IPIIPI00294516   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBN6
IntAct (EBI)Q9UBN6
FunCoupENSG00000173530
BioGRIDTNFRSF10D
InParanoidQ9UBN6
Interologous Interaction database Q9UBN6
IntegromeDBTNFRSF10D
STRING (EMBL)TNFRSF10D
Ontologies - Pathways
Ontology : AmiGOtransmembrane signaling receptor activity  apoptotic process  signal transduction  integral component of membrane  negative regulation of apoptotic process  TRAIL binding  
Ontology : EGO-EBItransmembrane signaling receptor activity  apoptotic process  signal transduction  integral component of membrane  negative regulation of apoptotic process  TRAIL binding  
Pathways : KEGGCytokine-cytokine receptor interaction    Apoptosis    Natural killer cell mediated cytotoxicity    Measles    Influenza A   
Protein Interaction DatabaseTNFRSF10D
Wikipedia pathwaysTNFRSF10D
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)TNFRSF10D
snp3D : Map Gene to Disease8793
SNP (GeneSNP Utah)TNFRSF10D
SNP : HGBaseTNFRSF10D
Genetic variants : HAPMAPTNFRSF10D
Exome VariantTNFRSF10D
1000_GenomesTNFRSF10D 
ICGC programENSG00000173530 
Somatic Mutations in Cancer : COSMICTNFRSF10D 
CONAN: Copy Number AnalysisTNFRSF10D 
Mutations and Diseases : HGMDTNFRSF10D
Mutations and Diseases : intOGenTNFRSF10D
Genomic VariantsTNFRSF10D  TNFRSF10D [DGVbeta]
dbVarTNFRSF10D
ClinVarTNFRSF10D
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM603614   
MedgenTNFRSF10D
GENETestsTNFRSF10D
Disease Genetic AssociationTNFRSF10D
Huge Navigator TNFRSF10D [HugePedia]  TNFRSF10D [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneTNFRSF10D
Homology/Alignments : Family Browser (UCSC)TNFRSF10D
Phylogenetic Trees/Animal Genes : TreeFamTNFRSF10D
Chemical/Protein Interactions : CTD8793
Chemical/Pharm GKB GenePA36600
Clinical trialTNFRSF10D
Cancer Resource (Charite)ENSG00000173530
Other databases
Probes
Litterature
PubMed57 Pubmed reference(s) in Entrez
CoreMineTNFRSF10D
iHOPTNFRSF10D
OncoSearchTNFRSF10D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 26 17:08:08 CEST 2014

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