Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

UGT1A10 (UDP glucuronosyltransferase family 1 member A10)

Identity

Alias_namesUDP glycosyltransferase 1 family
Alias_symbol (synonym)UGT1J
Other aliasUDPGT
UGT-1J
UGT1-10
UGT1.10
HGNC (Hugo) UGT1A10
LocusID (NCBI) 54575
Atlas_Id 46276
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 233636477 and ends at 233773305 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UGT1A10   12531
Cards
Entrez_Gene (NCBI)UGT1A10  54575  UDP glucuronosyltransferase family 1 member A10
AliasesUDPGT; UGT-1J; UGT1-10; UGT1.10; 
UGT1J
GeneCards (Weizmann)UGT1A10
Ensembl hg19 (Hinxton)ENSG00000242515 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242515 [Gene_View]  chr2:233636477-233773305 [Contig_View]  UGT1A10 [Vega]
ICGC DataPortalENSG00000242515
TCGA cBioPortalUGT1A10
AceView (NCBI)UGT1A10
Genatlas (Paris)UGT1A10
WikiGenes54575
SOURCE (Princeton)UGT1A10
Genetics Home Reference (NIH)UGT1A10
Genomic and cartography
GoldenPath hg38 (UCSC)UGT1A10  -     chr2:233636477-233773305 +  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UGT1A10  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblUGT1A10 - 2q37.1 [CytoView hg19]  UGT1A10 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBIUGT1A10 [Mapview hg19]  UGT1A10 [Mapview hg38]
OMIM606435   
Gene and transcription
Genbank (Entrez)AK025403 AY435137 BC020971 BC053576 BC069210
RefSeq transcript (Entrez)NM_019075
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UGT1A10
Cluster EST : UnigeneHs.554822 [ NCBI ]
CGAP (NCI)Hs.554822
Alternative Splicing GalleryENSG00000242515
Gene ExpressionUGT1A10 [ NCBI-GEO ]   UGT1A10 [ EBI - ARRAY_EXPRESS ]   UGT1A10 [ SEEK ]   UGT1A10 [ MEM ]
Gene Expression Viewer (FireBrowse)UGT1A10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54575
GTEX Portal (Tissue expression)UGT1A10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HAW8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HAW8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HAW8
Splice isoforms : SwissVarQ9HAW8
Catalytic activity : Enzyme2.4.1.17 [ Enzyme-Expasy ]   2.4.1.172.4.1.17 [ IntEnz-EBI ]   2.4.1.17 [ BRENDA ]   2.4.1.17 [ KEGG ]   
PhosPhoSitePlusQ9HAW8
Domaine pattern : Prosite (Expaxy)UDPGT (PS00375)   
Domains : Interpro (EBI)UDP_glucos_trans   
Domain families : Pfam (Sanger)UDPGT (PF00201)   
Domain families : Pfam (NCBI)pfam00201   
Conserved Domain (NCBI)UGT1A10
DMDM Disease mutations54575
Blocks (Seattle)UGT1A10
SuperfamilyQ9HAW8
Human Protein AtlasENSG00000242515
Peptide AtlasQ9HAW8
HPRD07336
IPIIPI00233885   IPI00657799   
Protein Interaction databases
DIP (DOE-UCLA)Q9HAW8
IntAct (EBI)Q9HAW8
FunCoupENSG00000242515
BioGRIDUGT1A10
STRING (EMBL)UGT1A10
ZODIACUGT1A10
Ontologies - Pathways
QuickGOQ9HAW8
Ontology : AmiGOretinoic acid binding  protein kinase C binding  endoplasmic reticulum  endoplasmic reticulum membrane  glucuronosyltransferase activity  integral component of membrane  protein homodimerization activity  protein heterodimerization activity  flavone metabolic process  cellular glucuronidation  xenobiotic glucuronidation  
Ontology : EGO-EBIretinoic acid binding  protein kinase C binding  endoplasmic reticulum  endoplasmic reticulum membrane  glucuronosyltransferase activity  integral component of membrane  protein homodimerization activity  protein heterodimerization activity  flavone metabolic process  cellular glucuronidation  xenobiotic glucuronidation  
Pathways : KEGG   
NDEx NetworkUGT1A10
Atlas of Cancer Signalling NetworkUGT1A10
Wikipedia pathwaysUGT1A10
Orthology - Evolution
OrthoDB54575
GeneTree (enSembl)ENSG00000242515
Phylogenetic Trees/Animal Genes : TreeFamUGT1A10
HOVERGENQ9HAW8
HOGENOMQ9HAW8
Homologs : HomoloGeneUGT1A10
Homology/Alignments : Family Browser (UCSC)UGT1A10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUGT1A10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UGT1A10
dbVarUGT1A10
ClinVarUGT1A10
1000_GenomesUGT1A10 
Exome Variant ServerUGT1A10
ExAC (Exome Aggregation Consortium)UGT1A10 (select the gene name)
Genetic variants : HAPMAP54575
Genomic Variants (DGV)UGT1A10 [DGVbeta]
DECIPHERUGT1A10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUGT1A10 
Mutations
ICGC Data PortalUGT1A10 
TCGA Data PortalUGT1A10 
Broad Tumor PortalUGT1A10
OASIS PortalUGT1A10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUGT1A10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUGT1A10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UGT1A10
DgiDB (Drug Gene Interaction Database)UGT1A10
DoCM (Curated mutations)UGT1A10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UGT1A10 (select a term)
intoGenUGT1A10
Cancer3DUGT1A10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606435   
Orphanet
MedgenUGT1A10
Genetic Testing Registry UGT1A10
NextProtQ9HAW8 [Medical]
TSGene54575
GENETestsUGT1A10
Target ValidationUGT1A10
Huge Navigator UGT1A10 [HugePedia]
snp3D : Map Gene to Disease54575
BioCentury BCIQUGT1A10
ClinGenUGT1A10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54575
Chemical/Pharm GKB GenePA37174
Clinical trialUGT1A10
Miscellaneous
canSAR (ICR)UGT1A10 (select the gene name)
Probes
Litterature
PubMed74 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUGT1A10
EVEXUGT1A10
GoPubMedUGT1A10
iHOPUGT1A10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 14:11:08 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.