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UST (uronyl 2-sulfotransferase)

Identity

Alias_symbol (synonym)2OST
Other alias
HGNC (Hugo) UST
LocusID (NCBI) 10090
Atlas_Id 42775
Location 6q25.1  [Link to chromosome band 6q25]
Location_base_pair Starts at 148747135 and ends at 149076990 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
UST (6q25.1) / ACVR1 (2q24.1)UST (6q25.1) / CNKSR3 (6q25.2)ZC3H12D (6q25.1) / UST (6q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UST   17223
Cards
Entrez_Gene (NCBI)UST  10090  uronyl 2-sulfotransferase
Aliases2OST
GeneCards (Weizmann)UST
Ensembl hg19 (Hinxton)ENSG00000111962 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111962 [Gene_View]  ENSG00000111962 [Sequence]  chr6:148747135-149076990 [Contig_View]  UST [Vega]
ICGC DataPortalENSG00000111962
TCGA cBioPortalUST
AceView (NCBI)UST
Genatlas (Paris)UST
WikiGenes10090
SOURCE (Princeton)UST
Genetics Home Reference (NIH)UST
Genomic and cartography
GoldenPath hg38 (UCSC)UST  -     chr6:148747135-149076990 +  6q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UST  -     6q25.1   [Description]    (hg19-Feb_2009)
EnsemblUST - 6q25.1 [CytoView hg19]  UST - 6q25.1 [CytoView hg38]
Mapping of homologs : NCBIUST [Mapview hg19]  UST [Mapview hg38]
OMIM610752   
Gene and transcription
Genbank (Entrez)AB020316 AI570697 AJ420554 AK292922 AK315320
RefSeq transcript (Entrez)NM_005715
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UST
Cluster EST : UnigeneHs.657370 [ NCBI ]
CGAP (NCI)Hs.657370
Alternative Splicing GalleryENSG00000111962
Gene ExpressionUST [ NCBI-GEO ]   UST [ EBI - ARRAY_EXPRESS ]   UST [ SEEK ]   UST [ MEM ]
Gene Expression Viewer (FireBrowse)UST [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10090
GTEX Portal (Tissue expression)UST
Human Protein AtlasENSG00000111962-UST [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2C2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2C2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2C2
Splice isoforms : SwissVarQ9Y2C2
PhosPhoSitePlusQ9Y2C2
Domains : Interpro (EBI)Heparan_SO4_2-O-STrfase    P-loop_NTPase    Sulfotransferase   
Domain families : Pfam (Sanger)Sulfotransfer_2 (PF03567)   
Domain families : Pfam (NCBI)pfam03567   
Conserved Domain (NCBI)UST
DMDM Disease mutations10090
Blocks (Seattle)UST
SuperfamilyQ9Y2C2
Human Protein Atlas [tissue]ENSG00000111962-UST [tissue]
Peptide AtlasQ9Y2C2
HPRD10298
IPIIPI00024704   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2C2
IntAct (EBI)Q9Y2C2
FunCoupENSG00000111962
BioGRIDUST
STRING (EMBL)UST
ZODIACUST
Ontologies - Pathways
QuickGOQ9Y2C2
Ontology : AmiGOGolgi membrane  protein sulfation  sulfotransferase activity  sulfotransferase activity  integral component of membrane  establishment of cell polarity  dermatan sulfate biosynthetic process  regulation of axonogenesis  
Ontology : EGO-EBIGolgi membrane  protein sulfation  sulfotransferase activity  sulfotransferase activity  integral component of membrane  establishment of cell polarity  dermatan sulfate biosynthetic process  regulation of axonogenesis  
Pathways : KEGGGlycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate   
NDEx NetworkUST
Atlas of Cancer Signalling NetworkUST
Wikipedia pathwaysUST
Orthology - Evolution
OrthoDB10090
GeneTree (enSembl)ENSG00000111962
Phylogenetic Trees/Animal Genes : TreeFamUST
HOVERGENQ9Y2C2
HOGENOMQ9Y2C2
Homologs : HomoloGeneUST
Homology/Alignments : Family Browser (UCSC)UST
Gene fusions - Rearrangements
Fusion : QuiverUST
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUST [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UST
dbVarUST
ClinVarUST
1000_GenomesUST 
Exome Variant ServerUST
ExAC (Exome Aggregation Consortium)ENSG00000111962
GNOMAD BrowserENSG00000111962
Varsome BrowserUST
Genetic variants : HAPMAP10090
Genomic Variants (DGV)UST [DGVbeta]
DECIPHERUST [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUST 
Mutations
ICGC Data PortalUST 
TCGA Data PortalUST 
Broad Tumor PortalUST
OASIS PortalUST [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUST  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUST
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UST
DgiDB (Drug Gene Interaction Database)UST
DoCM (Curated mutations)UST (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UST (select a term)
intoGenUST
Cancer3DUST(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610752   
Orphanet
DisGeNETUST
MedgenUST
Genetic Testing Registry UST
NextProtQ9Y2C2 [Medical]
TSGene10090
GENETestsUST
Target ValidationUST
Huge Navigator UST [HugePedia]
snp3D : Map Gene to Disease10090
BioCentury BCIQUST
ClinGenUST
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10090
Chemical/Pharm GKB GenePA38213
Clinical trialUST
Miscellaneous
canSAR (ICR)UST (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUST
EVEXUST
GoPubMedUST
iHOPUST
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:49:12 CET 2018

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