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VAV2 (vav guanine nucleotide exchange factor 2)

Identity

Alias_namesvav 2 oncogene
vav 2 guanine nucleotide exchange factor
Other aliasVAV-2
HGNC (Hugo) VAV2
LocusID (NCBI) 7410
Atlas_Id 42781
Location 9q34.2  [Link to chromosome band 9q34]
Location_base_pair Starts at 133761894 and ends at 133992324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KIAA0895L (16q22.1) / VAV2 (9q34.2)MAPKAP1 (9q33.3) / VAV2 (9q34.2)MEGF6 (1p36.32) / VAV2 (9q34.2)
VAV2 (9q34.2) / CCDC67 (11q21)VAV2 (9q34.2) / COL27A1 (9q32)VAV2 (9q34.2) / EFNB1 (Xq13.1)
VAV2 (9q34.2) / NOTCH1 (9q34.3)VAV2 (9q34.2) / QSOX2 (9q34.3)VAV2 (9q34.2) / TRUB2 (9q34.11)
VAV2 (9q34.2) / TSPO (22q13.2)VAV2 (9q34.2) / VAV2 (9q34.2)MAPKAP1 9q33.3 / VAV2 9q34.2
VAV2 9q34.2 / COL27A1 9q32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 4 ]

Solid Tumors TT_del09q34q34ID100033 TT_t0909q32q34ID108524 TT_t0909q33q34ID108544 TT_t0909q34q34ID108593


External links

Nomenclature
HGNC (Hugo)VAV2   12658
Cards
Entrez_Gene (NCBI)VAV2  7410  vav guanine nucleotide exchange factor 2
AliasesVAV-2
GeneCards (Weizmann)VAV2
Ensembl hg19 (Hinxton)ENSG00000160293 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160293 [Gene_View]  ENSG00000160293 [Sequence]  chr9:133761894-133992324 [Contig_View]  VAV2 [Vega]
ICGC DataPortalENSG00000160293
TCGA cBioPortalVAV2
AceView (NCBI)VAV2
Genatlas (Paris)VAV2
WikiGenes7410
SOURCE (Princeton)VAV2
Genetics Home Reference (NIH)VAV2
Genomic and cartography
GoldenPath hg38 (UCSC)VAV2  -     chr9:133761894-133992324 -  9q34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VAV2  -     9q34.2   [Description]    (hg19-Feb_2009)
GoldenPathVAV2 - 9q34.2 [CytoView hg19]  VAV2 - 9q34.2 [CytoView hg38]
ImmunoBaseENSG00000160293
Mapping of homologs : NCBIVAV2 [Mapview hg19]  VAV2 [Mapview hg38]
OMIM600428   
Gene and transcription
Genbank (Entrez)AJ420448 AK091622 AK123314 AK124271 AK130575
RefSeq transcript (Entrez)NM_001134398 NM_003371
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VAV2
Alternative Splicing GalleryENSG00000160293
Gene ExpressionVAV2 [ NCBI-GEO ]   VAV2 [ EBI - ARRAY_EXPRESS ]   VAV2 [ SEEK ]   VAV2 [ MEM ]
Gene Expression Viewer (FireBrowse)VAV2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7410
GTEX Portal (Tissue expression)VAV2
Human Protein AtlasENSG00000160293-VAV2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VAV2
DMDM Disease mutations7410
Blocks (Seattle)VAV2
Human Protein Atlas [tissue]ENSG00000160293-VAV2 [tissue]
HPRD02694
IPIIPI00472451   IPI00872160   IPI00004977   IPI00935955   IPI00983340   
Protein Interaction databases
FunCoupENSG00000160293
BioGRIDVAV2
STRING (EMBL)VAV2
ZODIACVAV2
Ontologies - Pathways
Huge Navigator VAV2 [HugePedia]
snp3D : Map Gene to Disease7410
BioCentury BCIQVAV2
ClinGenVAV2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7410
Chemical/Pharm GKB GenePA37281
Clinical trialVAV2
Miscellaneous
canSAR (ICR)VAV2 (select the gene name)
DataMed IndexVAV2
Probes
Litterature
PubMed113 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVAV2
EVEXVAV2
GoPubMedVAV2
iHOPVAV2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:16:08 CET 2020

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