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MTCP1 (Mature T Cell Proliferation 1)

Identity

Other namesC6.1B
HGNC (Hugo) MTCP1
Location Xq28
Location_base_pair Starts at 154292309 and ends at 154299547 bp from pter ( according to hg19-Feb_2009)  [Mapping]
Local_order centromere- Factor VIII - c6.1A - MTCP1 - telomere
 
  MTCP1 (Xq28) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics. Laboratories willing to validate the probes are welcome : contact rocchi@biologia.uniba.it

DNA/RNA

 
  DNA Diagram
Description 7 exons; about 10 kb
Transcription complex; alternative splicing: two donor sites in exon 1; transcripts A, the most abondant, ubiquitous: splicing from exon 1 to exon 6; transcripts B, rare: splicing from exon 1 to exon 2; initiation of the transcription: an alternative site of initiation of the transcription in intron 1 has been found in one tumor with a translocation breakpoint in intron 1

Protein

Description p8 MTCP1: coded by transcripts A, 68 amino acids; one domain formed by 3 alpha helices held together by two disulphide bridges in an antiparallel coiled-coil motif p13 MTCP1: coded by transcripts B, 107 amino acides; one domain with a b-barrel topology
Expression ubiquitously expressed protein expression undetectable in physiological conditions
Localisation mitochondrial cytosol
Function unknown unknown
Homology none TCL1 (39% identity, similar tridimentional structure)

Implicated in

Entity t(X;14)(q28;q12) / prolymphocytic leukaemia --> TCRA/D - MTCP1
Disease T-cell prolymphocytic leukaemia
Cytogenetics associated with i(8q)
Hybrid/Mutated Gene unconstant TCRA-c6.1A transcripts have been described
Abnormal Protein none
Oncogenesis over expression of p13 MTCP1 is considered as critical in the oncogenetic mechanism
  
Entity t(X;7)(q28;q35) / prolymphocytic leukaemia --> TCRB - MTCP1
Disease T-cell prolymphocytic leukemia
Oncogenesis over expression of p13 MTCP1
  

External links

Nomenclature
HGNC (Hugo)MTCP1   7423
Entrez_Gene (NCBI)MTCP1  4515  mature T-cell proliferation 1
Cards
AtlasMTCP1ID89
GeneCards (Weizmann)MTCP1
Ensembl (Hinxton)ENSG00000214827 [Gene_View]  MTCP1 [Vega]
AceView (NCBI)MTCP1
Genatlas (Paris)MTCP1
euGene (Indiana)4515
SOURCE (Stanford)NM_001018025
Gene Expression (Array Express) ENSG00000214827
Genomic and cartography
GoldenPath (UCSC)MTCP1  -  Xq28   chrX:154292309-154299547 -  Xq28   [Description]    (hg19-Feb_2009)
EnsemblMTCP1 - Xq28 [CytoView]
Mapping of homologs : NCBIMTCP1 [Mapview]
OMIM300116   
Gene and transcription
Gene : Genbank (Entrez)AA744518 AW976554 CR600926
Reference sequence (RefSeq transcript) :SRSNM_001018025
Reference transcript : EntrezNM_001018025
RefSeq genomic : SRSNC_000023 NG_005114 NT_167198
RefSeq genomic : EntrezNC_000023 NG_005114 NT_167198
Consensus coding sequences : CCDS NCBIMTCP1
Cluster EST : UnigeneHs.6917 [ SRS ] Hs.6917 [ NCBI ]
Alternative Splicing : Fast-db (Paris)16129
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP56278 (SRS) P56278 (Expasy) P56278 (Uniprot)
With graphics : InterProP56278
Splice isoforms : VarSplice FASTAP56278(VarSplice FASTA)
Domains : Interpro (SRS)TCL1_MTCP1   
Domains : Interpro (EBI)TCL1_MTCP1   
Related proteins : CluSTrP56278
Domain families : Pfam SRSTCL1_MTCP1 (PF01840)   
Domain families : Pfam SangerTCL1_MTCP1 (PF01840)   
Domain families : Pfam NCBIpfam01840   
Domain structure : Prodom (Prabi Lyon)TCL1_MTCP1 (PD015575)   
Blocks (Seattle)P56278
Crystal structure of protein : PDB SRS1A1X    1QTT    1QTU   
Crystal structure of protein : PDBSum1A1X    1QTT    1QTU   
Crystal structure of protein : IMB1A1X    1QTT    1QTU   
Crystal structure of protein : PDB RSDB1A1X    1QTT    1QTU   
Human Protein AtlasENSG00000214827
HPRD02122
Protein Interaction databases
DIP (DOE-UCLA)P56278
IntAct (EBI)P56278
FunCoupENSG00000214827
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIMTCP1
SNP : GeneSNP UtahMTCP1
SNP : HGBaseMTCP1
Genetic variants : HAPMAPMTCP1
Cancer Gene: CensusMTCP1 
Somatic Mutations in Cancer : COSMICMTCP1 
Translocation Breakpoints in Cancer : TICdbMTCP1 
Mutations and Diseases : HGMDMTCP1
Hereditary diseases : OMIM300116   
Hereditary diseases : GENETests300116   
Diseases : Genetic AssociationMTCP1
General knowledge
Homologs : HomoloGeneMTCP1
Homology/Alignments : Family Browser UCSCMTCP1
Phylogenetic Trees/Animal Genes : TreeFamMTCP1
Chemical/Protein Interactions : CTD4515
Keywords Ontology : AmiGOprotein binding  mitochondrion  cell proliferation  
Keywords Ontology : EGO-EBIprotein binding  mitochondrion  cell proliferation  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
ProbeCancer Cytogenetics (Bari)
Probes : ImagenesMTCP1 Related clones (RZPD - Berlin)
Literature
PubMed20 Pubmed reference(s) in Entrez
PubGeneMTCP1

Bibliography

The chromosomal translocation t(X;14)(q28;q11) in T-cell pro-lymphocytic leukaemia breaks within one gene and activates another.
Fisch P, Forster A, Sherrington PD, Dyer MJ, Rabbitts TH
Oncogene. 1993 ; 8 (12) : 3271-3276.
PMID 8247530
 
The MTCP-1/c6.1B gene encodes for a cytoplasmic 8 kD protein overexpressed in T cell leukemia bearing a t(X;14) translocation.
Soulier J, Madani A, Cacheux V, Rosenzwajg M, Sigaux F, Stern MH
Oncogene. 1994 ; 9 (12) : 3565-3570.
PMID 7970717
 
A gene on chromosome Xq28 associated with T-cell prolymphocytic leukemia in two patients with ataxia telangiectasia.
Thick J, Mak YF, Metcalfe J, Beatty D, Taylor AM
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K. 1994 ; 8 (4) : 564-573.
PMID 8152252
 
Expression of p13MTCP1 is restricted to mature T-cell proliferations with t(X;14) translocations.
Madani A, Choukroun V, Soulier J, Cacheux V, Claisse JF, Valensi F, Daliphard S, Cazin B, Levy V, Leblond V, Daniel MT, Sigaux F, Stern MH
Blood. 1996 ; 87 (5) : 1923-1927.
PMID 8634440
 
Expression of either the TCL1 oncogene, or transcripts from its homologue MTCP1/c6.1B, in leukaemic and non-leukaemic T cells from ataxia telangiectasia patients.
Thick J, Metcalfe JA, Mak YF, Beatty D, Minegishi M, Dyer MJ, Lucas G, Taylor AM
Oncogene. 1996 ; 12 (2) : 379-386.
PMID 8570215
 
Solution structure of human p8MTCP1, a cysteine-rich protein encoded by the MTCP1 oncogene, reveals a new alpha-helical assembly motif.
Barthe P, Yang YS, Chiche L, Hoh F, Strub MP, Guignard L, Soulier J, Stern MH, van Tilbeurgh H, Lhoste JM, Roumestand C
Journal of molecular biology. 1997 ; 274 (5) : 801-815.
PMID 9405159
 
Alternative origin of p13MTCP1-encoding transcripts in mature T-cell proliferations with t(X;14) translocations.
Gritti C, Choukroun V, Soulier J, Madani A, Dastot H, Leblond V, Radford-Weiss I, Valensi F, Varet B, Sigaux F, Stern MH
Oncogene. 1997 ; 15 (11) : 1329-1335.
PMID 9315101
 
Solution structure of the recombinant human oncoprotein p13MTCP1.
Yang YS, Guignard L, Padilla A, Hoh F, Strub MP, Stern MH, Lhoste JM, Roumestand C
Journal of biomolecular NMR. 1998 ; 11 (3) : 337-354.
PMID 9691281
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written03-1998Marc-Henri Stern
Unité INSERM U462, Centre Hayem, Hopital Saint Louis, 75475 Paris Cedex 10, France

Citation

This paper should be referenced as such :
Stern MH . MTCP1 (Mature T Cell Proliferation 1). Atlas Genet Cytogenet Oncol Haematol. March 1998 .
URL : http://AtlasGeneticsOncology.org/Genes/MTCP1ID89.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 15 14:46:47 CEST 2010

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