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MTCP1 (Mature T Cell Proliferation 1)

Identity

Other namesC6.1B
HGNC (Hugo) MTCP1
LocusID (NCBI) 4515
Location Xq28
Location_base_pair Starts at 154292309 and ends at 154299547 bp from pter ( according to hg19-Feb_2009)  [Mapping]
Local_order centromere- Factor VIII - c6.1A - MTCP1 - telomere
 
  MTCP1 (Xq28) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics. Laboratories willing to validate the probes are welcome : contact rocchi@biologia.uniba.it

DNA/RNA

 
  DNA Diagram
Description 7 exons; about 10 kb
Transcription complex; alternative splicing: two donor sites in exon 1; transcripts A, the most abondant, ubiquitous: splicing from exon 1 to exon 6; transcripts B, rare: splicing from exon 1 to exon 2; initiation of the transcription: an alternative site of initiation of the transcription in intron 1 has been found in one tumor with a translocation breakpoint in intron 1

Protein

Description p8 MTCP1: coded by transcripts A, 68 amino acids; one domain formed by 3 alpha helices held together by two disulphide bridges in an antiparallel coiled-coil motif p13 MTCP1: coded by transcripts B, 107 amino acides; one domain with a b-barrel topology
Expression ubiquitously expressed protein expression undetectable in physiological conditions
Localisation mitochondrial cytosol
Function unknown unknown
Homology none TCL1 (39% identity, similar tridimentional structure)

Implicated in

Entity t(X;14)(q28;q12) / prolymphocytic leukaemia --> TCRA/D - MTCP1
Disease T-cell prolymphocytic leukaemia
Cytogenetics associated with i(8q)
Hybrid/Mutated Gene unconstant TCRA-c6.1A transcripts have been described
Abnormal Protein none
Oncogenesis over expression of p13 MTCP1 is considered as critical in the oncogenetic mechanism
  
Entity t(X;7)(q28;q35) / prolymphocytic leukaemia --> TCRB - MTCP1
Disease T-cell prolymphocytic leukemia
Oncogenesis over expression of p13 MTCP1
  

External links

Nomenclature
HGNC (Hugo)MTCP1   7423
Entrez_Gene (NCBI)MTCP1  4515  mature T-cell proliferation 1
Cards
AtlasMTCP1ID89
GeneCards (Weizmann)MTCP1
Ensembl (Hinxton)ENSG00000214827 [Gene_View]  chrX:154292309-154299547 [Contig_View]  MTCP1 [Vega]
AceView (NCBI)MTCP1
Genatlas (Paris)MTCP1
euGene (Indiana)4515
SOURCE (Stanford)NM_001018025 NM_014221
Genomic and cartography
GoldenPath (UCSC)MTCP1  -  Xq28   chrX:154292309-154299547 -  Xq28   [Description]    (hg19-Feb_2009)
EnsemblMTCP1 - Xq28 [CytoView]
Mapping of homologs : NCBIMTCP1 [Mapview]
OMIM300116   
Gene and transcription
Genbank (Entrez)AA744518 AW976554
RefSeq transcript (SRS)NM_001018025 NM_014221
RefSeq transcript (Entrez)NM_001018025 NM_014221
RefSeq genomic (SRS)AC_000155 NC_000023 NG_029506 NT_167198 NW_001842420
RefSeq genomic (Entrez)AC_000155 NC_000023 NG_029506 NT_167198 NW_001842420
Consensus coding sequences : CCDS (NCBI)MTCP1
Cluster EST : UnigeneHs.6917 [ SRS ] Hs.6917 [ NCBI ]
Alternative Splicing : Fast-db (Paris)16129
Alternative Splicing GalleryENSG00000214827
Gene ExpressionMTCP1 [ NCBI-GEO ]   MTCP1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP56278 (SRS) P56278 (Uniprot)
With graphics : InterProP56278
Splice isoforms : SwissVarP56278(Swissvar)
Domains : Interpro (SRS)TCL1_MTCP1   
Domains : Interpro (EBI)TCL1_MTCP1   
Related proteins : CluSTrP56278
Domain families : Pfam (SRS)TCL1_MTCP1 (PF01840)   
Domain families : Pfam (Sanger)TCL1_MTCP1 (PF01840)   
Domain families : Pfam (NCBI)pfam01840   
Domain structure : Prodom (Prabi Lyon)TCL1_MTCP1 (PD015575)   
Blocks (Seattle)P56278
PDB (SRS)1A1X    1QTT    1QTU   
PDB (PDBSum)1A1X    1QTT    1QTU   
PDB (IMB)1A1X    1QTT    1QTU   
PDB (RSDB)1A1X    1QTT    1QTU   
Human Protein AtlasENSG00000214827
HPRD02122
IPIIPI00447137   IPI00964570   
Protein Interaction databases
DIP (DOE-UCLA)P56278
IntAct (EBI)P56278
FunCoupENSG00000214827
REACTOMEMTCP1
BioGRIDMTCP1
InParanoidP56278
Interologous Interaction database P56278
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MTCP1
SNP (GeneSNP Utah)MTCP1
SNP : HGBaseMTCP1
Genetic variants : HAPMAPMTCP1
Cancer Gene: CensusMTCP1 
Somatic Mutations in Cancer : COSMICMTCP1 
CONAN: Copy Number AnalysisMTCP1 
Mutations and Diseases : HGMDMTCP1
OMIM300116   
GENETests300116   
Disease Genetic AssociationMTCP1
Huge Navigator MTCP1 [HugePedia]  MTCP1 [HugeCancerGEM]
Genomic VariantsMTCP1
snp3D : Map Gene to Disease4515
General knowledge
Homologs : HomoloGeneMTCP1
Homology/Alignments : Family Browser (UCSC)MTCP1
Phylogenetic Trees/Animal Genes : TreeFamMTCP1
Chemical/Protein Interactions : CTD4515
Chemical/Pharm GKB GenePA164742098
Clinical trialMTCP1
Cancer Resource (Charite)ENSG00000214827
Ontology : AmiGOmitochondrion  cell proliferation  
Ontology : EGO-EBImitochondrion  cell proliferation  
Other databases
Probes
ProbeCancer Cytogenetics (Bari)
Probes : ImagenesMTCP1 Related clones (RZPD - Berlin)
Litterature
PubMed20 Pubmed reference(s) in Entrez
PubGeneMTCP1
iHOPMTCP1

Bibliography

The chromosomal translocation t(X;14)(q28;q11) in T-cell pro-lymphocytic leukaemia breaks within one gene and activates another.
Fisch P, Forster A, Sherrington PD, Dyer MJ, Rabbitts TH
Oncogene. 1993 ; 8 (12) : 3271-3276.
PMID 8247530
 
The MTCP-1/c6.1B gene encodes for a cytoplasmic 8 kD protein overexpressed in T cell leukemia bearing a t(X;14) translocation.
Soulier J, Madani A, Cacheux V, Rosenzwajg M, Sigaux F, Stern MH
Oncogene. 1994 ; 9 (12) : 3565-3570.
PMID 7970717
 
A gene on chromosome Xq28 associated with T-cell prolymphocytic leukemia in two patients with ataxia telangiectasia.
Thick J, Mak YF, Metcalfe J, Beatty D, Taylor AM
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K. 1994 ; 8 (4) : 564-573.
PMID 8152252
 
Expression of p13MTCP1 is restricted to mature T-cell proliferations with t(X;14) translocations.
Madani A, Choukroun V, Soulier J, Cacheux V, Claisse JF, Valensi F, Daliphard S, Cazin B, Levy V, Leblond V, Daniel MT, Sigaux F, Stern MH
Blood. 1996 ; 87 (5) : 1923-1927.
PMID 8634440
 
Expression of either the TCL1 oncogene, or transcripts from its homologue MTCP1/c6.1B, in leukaemic and non-leukaemic T cells from ataxia telangiectasia patients.
Thick J, Metcalfe JA, Mak YF, Beatty D, Minegishi M, Dyer MJ, Lucas G, Taylor AM
Oncogene. 1996 ; 12 (2) : 379-386.
PMID 8570215
 
Solution structure of human p8MTCP1, a cysteine-rich protein encoded by the MTCP1 oncogene, reveals a new alpha-helical assembly motif.
Barthe P, Yang YS, Chiche L, Hoh F, Strub MP, Guignard L, Soulier J, Stern MH, van Tilbeurgh H, Lhoste JM, Roumestand C
Journal of molecular biology. 1997 ; 274 (5) : 801-815.
PMID 9405159
 
Alternative origin of p13MTCP1-encoding transcripts in mature T-cell proliferations with t(X;14) translocations.
Gritti C, Choukroun V, Soulier J, Madani A, Dastot H, Leblond V, Radford-Weiss I, Valensi F, Varet B, Sigaux F, Stern MH
Oncogene. 1997 ; 15 (11) : 1329-1335.
PMID 9315101
 
Solution structure of the recombinant human oncoprotein p13MTCP1.
Yang YS, Guignard L, Padilla A, Hoh F, Strub MP, Stern MH, Lhoste JM, Roumestand C
Journal of biomolecular NMR. 1998 ; 11 (3) : 337-354.
PMID 9691281
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written03-1998Marc-Henri Stern
Unité INSERM U462, Centre Hayem, Hopital Saint Louis, 75475 Paris Cedex 10, France

Citation

This paper should be referenced as such :
Stern MH . MTCP1 (Mature T Cell Proliferation 1). Atlas Genet Cytogenet Oncol Haematol. March 1998 .
URL : http://AtlasGeneticsOncology.org/Genes/MTCP1ID89.html

This paper is referenced by INIST as such :
http://documents.irevues.inist.fr/bitstream/2042/37405/1/03-1998-MTCP1ID89.pdf   [ Bibliographic record ]

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indexed on : Sat Apr 28 15:04:53 CEST 2012

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