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Thyroid: Papillary carcinoma/Adenocarcinoma

Written2000-08Marco A Pierotti
Istituto Nazionale dei Tumori, Dept. of Experimental Oncology, Via Venezian, 1 20133 Milan, Italy

(Note : for Links provided by Atlas : click)

Identity

ICD-Topo C739 THYROID GLAND
ICD-Morpho 8140/3 Adenocarcinoma, NOS
Atlas_Id 5053
Phylum NeuroEndocrine/Endocrine System:Thyroid:Adenocarcinoma ou papillary carcinoma

Classification

Note
  • Papillary Thyroid Carcinomas (PTCs) derives from the thyroid follicular cells, as the other type of well-differentiated thyroid carcinomas, the follicular ones; however these differentiated thyroid cancers are regarded as different entities:
  • the follicular carcinoma, solitary and encapsulated, is associated with endemic goiter, a diet with low iodine intake and metastatizes almost exclusively via the blood stream, often to bones
  • the papillary carcinoma, on the contrary, is multifocal and associated with a previous radiation exposure, high iodine intake and metastatizes through lymphatic spread to regional lymph-nodes
  • Cytogenetics

    Cytogenetics
    Morphological
    seventy cases of papillary thyroid carcinomas (PTCs) have been reviewed, 51 of them displaying a normal karyotype (73%). In 10 cases non recurrent structural or numerical changes were observed. In particular, 9 cases showed recurrent structural changes including:
  • inv10(q11.2q21.2) in 5 tumors,
  • a t(10;17)(q11.2;q23) in two cases, and
  • a der(1) in the last two tumors
  • Genes involved and Proteins

    Note
  • these abnormalities represent the cytogenetic mechanisms which activate the receptor tyrosine kinase (RTK) proto-oncogenes RET on chromosome 10 and NTRK1 on chromosome 1, respectively
  • the alternative involvement of the RET and NTRK1 tyrosine kinases receptors in the development of a consistent fraction (45%) of PTCs has been demonstrated
  • somatic rearrangements, both intra and interchromosomal, of RET and NTRK1 produce several forms of oncogenes
  • in all cases, RET or NTRK1 tyrosine kinase (TK) domains are fused to the amino-terminus of different gene products. The latter have been defined as 'activating' genes.
  • Gene Name RET
    Location 10q11.2
    Protein the RET proto-oncogene codes for the tyrosine kinase receptor of GDNF (Glial cell Derived Neurotrophic Factor) and Neurturin (NTN); activation of RET by GDNF or NTN has been shown to require one of two accessory proteins, GDNFRa and GDNFRb.
    Germinal mutation germline mutations of proto-RET result in human diseases including familial medullary thyroid carcinoma MTC, multiple endocrine neoplasia type 2A and 2B (MEN2A and MEN2B) and Hirschsprung¼s disease
    Somatic mutation RET is expressed in the thyroid by normal C cells and their pathologic counterpart, medullary thyroid carcinoma (MTC); moreover, RET expression can be detected in normal adrenal medulla and pheochromocytomas

    Gene Name CCDC6
    Location 10q21

    Gene Name AKAP10
    Location 17q23

    Gene Name NCOA4
    Location 10q11

    Gene Name NTRK1
    Location 1q22
    Dna / Rna the NTRK1 proto-oncogene encodes the high affinity receptor for Nerve Growth Factor (NGF)
    Protein NTRK1 is primarily expressed in the nervous system
    Germinal mutation mice carrying a germline mutation that eliminates NTRK1 show severe sensory and sympathetic neuropathies, including the loss of neurons of the dorsal root ganglia associated with nociceptive functions, and most die within one month of birth; interestingly, point mutations leading to the inactivation of the NTRK1 receptor, have been identified in patient with CIPA (Congenital Insensitivity to Pain with Anhidrosis), an autosomal-recessive disorder characterized by absence of reaction to noxious stimuli; thus NGF signalling via NTRK1 appears essential for the development and maintenance of both the peripheral and central nervous systems

    Gene Name TPM3
    Location 1q22-23

    Gene Name TPR
    Location 1q25

    Gene Name TFG
    Location 3q12

    Result of the chromosomal anomaly

    Hybrid Gene
    Note the RET/PTC1 oncogene, represents the first example of oncogene activation in solid tumors due to an acquired chromosomal abnormality
    Description RET/PTC1 is a chimeric transforming sequence generated by the fusion of the TK domain of RET to the 5' terminal sequence of the gene H4/D10S170; both partners in the fusion have been localized to chromosome 10q and their fusion is the molecular event consequent to a paracentromeric inversion of chromosome 10q, inv 10 (q11.2 q21.2)
    Fusion Protein
    Oncogenesis H4/D10S170 has been shown to display a coiled-coil sequence which confers to the oncoprotein the ability to form dimers, resulting in a constitutive activation of the TK function
      
    Hybrid Gene
    Note a second example of RET activation is the RET/PTC2 oncogene; the cytogenetic analysis of one case of RET/PTC2 positive carcinoma revealed that this oncogene arises from a t(10;17)(q11.2;q23) reciprocal translocation
    Description in this case the rearrangement involved the gene of the regulatory subunit RI-a of Protein Kinase A, which maps to chromosome 17q23
    Fusion Protein
    Oncogenesis interestingly, like the H4 gene, RI-a also contains a dimerization domain and the construction of RET/PTC2 mutants with deletions in RI-a, has demonstrated that the formation of dimers is necessary to express the activity of the oncogene
      
    Hybrid Gene
    Note finally, a third example of RET activation in PTCs has been reported, RET/PTC3; also in this case, a paracentric inversion of the long arm of chromosome 10 was identified
    Fusion Protein
    Oncogenesis In this oncogene, the TK domain of RET is fused to sequences derived from a previously unknown gene named ELE1 (otherwise named RFG). ELE1 is localized in the same chromosomal region of RET, 10q11.2
      
    Hybrid Gene
    Note several cases of PTCs showed an activation of the NTRK1 proto-oncogene; in three specimens a chimeric sequence generated by the rearrangement of an isoform of non-muscle tropomyosin (TPM3) and NTRK1 was identified; the former has been mapped to chromosome 1q22-23; therefore, the NTRK1 localization on 1q22 suggested that a 1q intrachromosomal rearrangement could have generated the TRK oncogene
    Description molecular analysis of TRK positive PTCs revealed the presence, not only of the product of the oncogenic rearrangement (5'TPM3-3'NTRK1), but also of that related to the reciprocal event (5'NTRK1-3'TPM3); this finding indicates that an intrachromosomal inversion, inv(1q), provided the mechanism of the NTRK1 oncogenic activation in these tumors.
      
    Hybrid Gene
    Note in the remaining cases genes different from TPM provided the 5' terminus of the oncogene; therefore the latter were designated as TRK-T. three cases showed the fusion of NTRK1-TK domain to sequences of the TPR (Translocated Promoter Region) gene, originally identified as part of the MET oncogene
    Description the first of these cases, TRK-T1, is encoded by a hybrid mRNA containing 598 nucleotides of TPR and 1148 nucleotides of NTRK1; the TPR locus is on chromosome 1q25; therefore, as for TRK, an intrachromosomal rearrangement, molecularly defined as an inversion of 1q, is responsible for its formation; a rearrangement involving the same two genes, TPR and NTRK1, has been found in two other papillary thyroid tumors; although the two rearrangements involve different genomic regions of the partner genes, they occur in the same intron of both TPR and NTRK1; as a consequence, the same mRNA and 1323 aminoacid oncoprotein are produced and designated TRK-T2 in both cases; similarly to TRK-T1, the molecular characterization of these rearrangements indicated the chromosomal mechanism leading to the oncogenic activation as an inv(1q)
      
    Hybrid Gene
    Note as for the last two oncogenes derived from NTRK1 activation, one is still uncharacterized whereas the other, designated TRK-T3, has recently been analyzed.
    Description sequence analysis revealed that TRK-T3 contains 1412 nucleotides of NTRK1 preceded by 598 nucleotides belonging to a novel gene named TFG (TRK Fused Gene) encoding a 68 kDa cytoplasmic protein; the latter displays, in the TFG part, a coiled-coil region that endows the oncoprotein with the capability to form complexes, as shown by the TK domains; in this condition, the latter can recruit SH2 and SH3 containing cytoplasmic effector proteins
      

    To be noted

    in fact Ret/ptcs oncoproteins and in some cases Trk oncoproteins were demonstrated to bind and activate PLCg, an SH2-containing enzyme catalyzing the hydrolisis of phosphatydilinositol biphospate to inositol trophoshate and diacyl glicerol, and Shc, an adaptor protein belonging to the Ras pathway; the relocalization in the cytoplasm of RET and NTRK1 enzymatic activity could allow their interaction with unusual substrata, perhaps modifying their functional properties

    Bibliography

    RET/PTC rearrangements and BRAF mutations in thyroid tumorigenesis.
    Ciampi R, Nikiforov YE
    Endocrinology. 2007 ; 148 (3) : 936-941.
    PMID 16946010
     

    Citation

    This paper should be referenced as such :
    Pierotti, MA
    Thyroid: Papillary carcinoma
    Atlas Genet Cytogenet Oncol Haematol. 2000;4(4):209-211.
    Free journal version : [ pdf ]   [ DOI ]
    On line version : http://AtlasGeneticsOncology.org/Tumors/PapilThyroidCarID5053.html


    Other genes implicated (Data extracted from papers in the Atlas) [ 71 ]

    Genes AAMP ACVRL1 AKAP9 BAG3 BRAF BRAF CAV1 ADGRE5 CST6 DIO2
    DPP4 EDIL3 EIF2AK2 ERC1 EPHA2 FGFR1 FOXE1 FUT8 GADD45GIP1 CCDC6
    HGF HLTF ILK IRS2 KCNH1 LPAR2 MAGEA3 MCM3 MCM5 MIR141
    MIR146B MIR191 MIR200C MIR21 MIR21 MIR221 MIR222 MKI67 NCOA4
    NKX2-1 NME1 NNMT NRCAM P2RX7 PRDX1 PAX8 PFKFB2 PIWIL2 PRKAR1A
    PTEN PTK2 PTPRJ RAP1GAP RET S100A2 S100A8 S100A9 SEPT7
    SERPINB5 SLC5A8 SMYD2 SNAI1 TFG THRB TPM3 TRIM24 TRIM27
    TSHR

    Translocations implicated (Data extracted from papers in the Atlas)

     inv(1)(q21q23) TPM3/NTRK1
     inv(1)(q23q31) TPR/NTRK1
     inv(10)(q11q11) NCOA4/RET
     inv(10)(q11q21) CCDC6/RET
     inv(7)(q21q34) AKAP9/BRAF
     t(1;3)(q23;q12) TFG/NTRK1
     t(10;17)(q11;q24) PRKAR1A/RET

    External links

    Mitelman database inv(1)(q21q23) TPM3/NTRK1 [Case List]    inv(1)(q21q23) TPM3/NTRK1 [Association List] Mitelman database (CGAP - NCBI)
    Mitelman database inv(1)(q23q31) TPR/NTRK1 [Case List]    inv(1)(q23q31) TPR/NTRK1 [Association List] Mitelman database (CGAP - NCBI)
    Mitelman database inv(10)(q11q11) NCOA4/RET [Case List]    inv(10)(q11q11) NCOA4/RET [Association List] Mitelman database (CGAP - NCBI)
    Mitelman database inv(10)(q11q21) CCDC6/RET [Case List]    inv(10)(q11q21) CCDC6/RET [Association List] Mitelman database (CGAP - NCBI)
    Mitelman database inv(7)(q21q34) AKAP9/BRAF [Case List]    inv(7)(q21q34) AKAP9/BRAF [Association List] Mitelman database (CGAP - NCBI)
    Mitelman database t(1;3)(q23;q12) TFG/NTRK1 [Case List]    t(1;3)(q23;q12) TFG/NTRK1 [Association List] Mitelman database (CGAP - NCBI)
    Mitelman database t(10;17)(q11;q24) PRKAR1A/RET [Case List]    t(10;17)(q11;q24) PRKAR1A/RET [Association List] Mitelman database (CGAP - NCBI)
    arrayMap Topo ( C73) arrayMap ((UZH-SIB Zurich)   [auto + random 100 samples .. if exist ]   [tabulated segments]
     
    Mitelman databaseAKAP9/BRAF[MCList]    AKAP9 (7q21.2) BRAF (7q34)   
    Mitelman databaseAKAP9/BRAF[MCList]    AKAP9 (7q21.2) BRAF (7q34)   inv(7)(q21q34)
    COSMIC_fusionCCDC6 (10q21.2) RET (10q11.21)    [fusion1271] [fusion1272] [fusion1480] [fusion1515] [fusion1516] [fusion1518] [fusion1532] [fusion1533]
    Mitelman databaseCCDC6/RET[MCList]    CCDC6 (10q21.2) RET (10q11.21)   inv(10)(p11q11)
    TCGA_FusionCCDC6/RET    CCDC6 (10q21.2) RET (10q11.21)
    TICdbCCDC6/RET    CCDC6 (10q21.2) RET (10q11.21)
    Mitelman databaseNCOA4/RET[MCList]    NCOA4 (10q11.23) RET (10q11.21)   inv(10)(p11q11)
    TCGA_FusionNCOA4/RET    NCOA4 (10q11.23) RET (10q11.21)
    TICdbNCOA4/RET    NCOA4 (10q11.23) RET (10q11.21)
    COSMIC_fusionPRKAR1A (17q24.2) RET (10q11.21)    [fusion1511] [fusion1512]
    Mitelman databasePRKAR1A/RET[MCList]    PRKAR1A (17q24.2) RET (10q11.21)   inv(10)(q11q11)
    TICdbPRKAR1A/RET    PRKAR1A (17q24.2) RET (10q11.21)
    COSMIC_fusionTFG (3q12.2) NTRK1 (1q23.1)    [fusion1328] [fusion1331] [fusion1337]
    Mitelman databaseTFG/NTRK1[MCList]    TFG (3q12.2) NTRK1 (1q23.1)   t(1;3)(q23;q12)
    TCGA_FusionTFG/NTRK1    TFG (3q12.2) NTRK1 (1q23.1)
    TICdbTFG/NTRK1    TFG (3q12.2) NTRK1 (1q23.1)
    COSMIC_fusionTPM3 (1q21.3) NTRK1 (1q23.1)    [fusion1318] [fusion1319] [fusion1320] [fusion1329] [fusion1330]
    Mitelman databaseTPM3/NTRK1[MCList]    TPM3 (1q21.3) NTRK1 (1q23.1)   inv(1)(q21q23)
    TCGA_FusionTPM3/NTRK1    TPM3 (1q21.3) NTRK1 (1q23.1)
    Mitelman databaseTPR/NTRK1[MCList]    TPR (1q31.1) NTRK1 (1q23.1)   inv(1)(q23q31)
    TICdbTPR/NTRK1    TPR (1q31.1) NTRK1 (1q23.1)
     
    Other databaseICGC Data Portal - [THCA-SA] Thyroid Cancer - SA
    Other databaseICGC Data Portal - [THCA-US] Head and Neck Thyroid Carcinoma - TCGA, US
    Other databasecBioPortal: Thyroid Carcinoma (TCGA, Provisional)
    Other databaseThyroid carcinoma ( intOGen )
    Other databaseThyroid Carcinoma (TCGA)(OASIS Portal)
    Other databaseThyroid Carcinoma [ Genomic Data Commons - NCI TCGA-THCA]
    Disease databaseThyroid: Papillary carcinoma/Adenocarcinoma
    REVIEW articlesautomatic search in PubMed
    Last year articlesautomatic search in PubMed


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    indexed on : Thu Jan 12 11:17:02 CET 2017


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