MCF2L2 (MCF.2 cell line derived transforming sequence-like 2)

2004-11-01  

Identity

HGNC
MCF2L2
LOCATION
3q27.1
LOCUSID
23101
ALIAS
ARHGEF22
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 23101
HGNC: 30319
Ensembl: ENSG00000053524

Variants:

dbSNP: 23101
ClinVar: 23101
TCGA: ENSG00000053524
COSMIC: MCF2L2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000053524ENST00000328913Q86YR7
ENSG00000053524ENST00000414362Q86YR7
ENSG00000053524ENST00000447025Q86YR7
ENSG00000053524ENST00000473233Q86YR7
ENSG00000053524ENST00000482017C9J326
ENSG00000053524ENST00000640043A0A1W2PP43

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
206670952010Effects of MCF2L2, ADIPOQ and SOX2 genetic polymorphisms on the development of nephropathy in type 1 Diabetes Mellitus.10
206670952010Effects of MCF2L2, ADIPOQ and SOX2 genetic polymorphisms on the development of nephropathy in type 1 Diabetes Mellitus.10
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
206670952010Effects of MCF2L2, ADIPOQ and SOX2 genetic polymorphisms on the development of nephropathy in type 1 Diabetes Mellitus.10
206670952010Effects of MCF2L2, ADIPOQ and SOX2 genetic polymorphisms on the development of nephropathy in type 1 Diabetes Mellitus.10
196487522009Family-based association study of the MCF2L2 gene and polycystic ovary syndrome.2
196487522009Family-based association study of the MCF2L2 gene and polycystic ovary syndrome.2
196487522009Family-based association study of the MCF2L2 gene and polycystic ovary syndrome.2
196487522009Family-based association study of the MCF2L2 gene and polycystic ovary syndrome.2
182596842008Search for type 2 diabetes susceptibility genes on chromosomes 1q, 3q and 12q.19
182596842008Search for type 2 diabetes susceptibility genes on chromosomes 1q, 3q and 12q.19

Citation

Dessen P

MCF2L2 (MCF.2 cell line derived transforming sequence-like 2)

Atlas Genet Cytogenet Oncol Haematol. 2004-11-01

Online version: http://atlasgeneticsoncology.org/gene/42941/css/haematological-explorer/js/lib/meetings/