STRBP (spermatid perinuclear RNA binding protein)

2014-08-01  

Identity

HGNC
STRBP
LOCATION
9q33.3
LOCUSID
55342
ALIAS
HEL162,ILF3L,SPNR,p74
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55342
MIM: 611138
HGNC: 16462
Ensembl: ENSG00000165209

Variants:

dbSNP: 55342
ClinVar: 55342
TCGA: ENSG00000165209
COSMIC: STRBP

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000165209ENST00000348403Q96SI9
ENSG00000165209ENST00000348403V9HWK4
ENSG00000165209ENST00000360998Q96SI9
ENSG00000165209ENST00000407982Q5JPA5
ENSG00000165209ENST00000447404Q96SI9
ENSG00000165209ENST00000447404V9HWK4
ENSG00000165209ENST00000471564H0YD70
ENSG00000165209ENST00000478973H0YD00
ENSG00000165209ENST00000479114E9PKQ0
ENSG00000165209ENST00000496533H0YC91

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
382804762024Spermatid perinuclear RNA-binding protein promotes UBR5-mediated proteolysis of Dicer to accelerate triple-negative breast cancer progression.0
383409452024CircSTRBP contributes to H(2)O(2)-induced lens epithelium cell dysfunction through increasing NOX4 mRNA stability by recruiting IGF2BP1.0
382804762024Spermatid perinuclear RNA-binding protein promotes UBR5-mediated proteolysis of Dicer to accelerate triple-negative breast cancer progression.0
383409452024CircSTRBP contributes to H(2)O(2)-induced lens epithelium cell dysfunction through increasing NOX4 mRNA stability by recruiting IGF2BP1.0
223911372012Expression of STRBP mRNA in patients with cryptorchidism and Down's syndrome.4
223911372012Expression of STRBP mRNA in patients with cryptorchidism and Down's syndrome.4

Citation

Dessen P

STRBP (spermatid perinuclear RNA binding protein)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54673/case-report-explorer/js/humanGenome