GACAT3 (gastric cancer associated transcript 3)

2015-02-01  

Identity

HGNC
GACAT3
LOCATION
2p24.3
LOCUSID
104797537
ALIAS
LINC01458,lncRNA-AC130710

Other Information

Locus ID:

NCBI: 104797537
MIM: 616132
HGNC: 50847
Ensembl: ENSG00000236289

Variants:

dbSNP: 104797537
ClinVar: 104797537
TCGA: ENSG00000236289
COSMIC: GACAT3

RNA/Proteins

Expression (GTEx)

0
1
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
324627182020LncRNAs GACAT3 and LINC00152 regulate each other through miR-103 and are associated with clinicopathological characteristics in colorectal cancer.8
324627182020LncRNAs GACAT3 and LINC00152 regulate each other through miR-103 and are associated with clinicopathological characteristics in colorectal cancer.8
303176102019Long noncoding RNA gastric cancer-associated transcript 3 plays oncogenic roles in glioma through sponging miR-3127-5p.13
305363792019Long noncoding RNA GACAT3 promotes glioma progression by sponging miR-135a.15
319831092019Association of LncRNA-GACAT3 with MRI features of breast cancer and its molecular mechanism.5
303176102019Long noncoding RNA gastric cancer-associated transcript 3 plays oncogenic roles in glioma through sponging miR-3127-5p.13
305363792019Long noncoding RNA GACAT3 promotes glioma progression by sponging miR-135a.15
319831092019Association of LncRNA-GACAT3 with MRI features of breast cancer and its molecular mechanism.5
290918582018LncRNA GACAT3 promotes gastric cancer progression by negatively regulating miR-497 expression.12
299453472018LncRNA GACAT3 predicts poor prognosis and promotes cell proliferation in breast cancer through regulation of miR-497/CCND2.25
300984262018LncRNA GACAT3 acts as a competing endogenous RNA of HMGA1 and alleviates cucurbitacin B-induced apoptosis of gastric cancer cells.12
290918582018LncRNA GACAT3 promotes gastric cancer progression by negatively regulating miR-497 expression.12
299453472018LncRNA GACAT3 predicts poor prognosis and promotes cell proliferation in breast cancer through regulation of miR-497/CCND2.25
300984262018LncRNA GACAT3 acts as a competing endogenous RNA of HMGA1 and alleviates cucurbitacin B-induced apoptosis of gastric cancer cells.12
276442472016Novel long non-coding RNA GACAT3 promotes gastric cancer cell proliferation through the IL-6/STAT3 signaling pathway.13

Citation

Dessen P

GACAT3 (gastric cancer associated transcript 3)

Atlas Genet Cytogenet Oncol Haematol. 2015-02-01

Online version: http://atlasgeneticsoncology.org/gene/55006/favicon/teaching-explorer/