ZBED3 (zinc finger BED-type containing 3)

2015-09-01  

Identity

HGNC
ZBED3
LOCATION
5q13.3
LOCUSID
84327
ALIAS
-

Other Information

Locus ID:

NCBI: 84327
MIM: 615250
HGNC: 20711
Ensembl: ENSG00000132846

Variants:

dbSNP: 84327
ClinVar: 84327
TCGA: ENSG00000132846
COSMIC: ZBED3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000132846ENST00000255198Q96IU2
ENSG00000132846ENST00000511587D6RIC4

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
381828962024RNA 5-methylcytosine writer NSUN5 promotes hepatocellular carcinoma cell proliferation via a ZBED3-dependent mechanism.2
381828962024RNA 5-methylcytosine writer NSUN5 promotes hepatocellular carcinoma cell proliferation via a ZBED3-dependent mechanism.2
352001112022Circular RNA hsa_circ_0119412 contributes to tumorigenesis of gastric cancer via the regulation of the miR-1298-5p/zinc finger BED-type containing 3 (ZBED3) axis.3
352001112022Circular RNA hsa_circ_0119412 contributes to tumorigenesis of gastric cancer via the regulation of the miR-1298-5p/zinc finger BED-type containing 3 (ZBED3) axis.3
344279782021Long noncoding RNA ZBED3-AS1 restrains breast cancer progression by targeting the microRNA-513a-5p/KLF6 axis.4
344279782021Long noncoding RNA ZBED3-AS1 restrains breast cancer progression by targeting the microRNA-513a-5p/KLF6 axis.4
304175762019Zbed3 promotes proliferation and invasion of lung cancer partly through regulating the function of Axin-Gsk3β complex.4
308059702019The function of BED finger domain of Zbed3 in regulating lung cancer cell proliferation.3
304175762019Zbed3 promotes proliferation and invasion of lung cancer partly through regulating the function of Axin-Gsk3β complex.4
308059702019The function of BED finger domain of Zbed3 in regulating lung cancer cell proliferation.3
283468592017Circulating Zbed3 Levels in Subjects With and Without Metabolic Syndrome.3
284319322017The LncRNA ZBED3-AS1 induces chondrogenesis of human synovial fluid mesenchymal stem cells.18
283468592017Circulating Zbed3 Levels in Subjects With and Without Metabolic Syndrome.3
284319322017The LncRNA ZBED3-AS1 induces chondrogenesis of human synovial fluid mesenchymal stem cells.18
252633892015Zbed3 contributes to malignant phenotype of lung cancer via regulating β-catenin and P120-catenin 1.7

Citation

Dessen P

ZBED3 (zinc finger BED-type containing 3)

Atlas Genet Cytogenet Oncol Haematol. 2015-09-01

Online version: http://atlasgeneticsoncology.org/gene/55409/js/lib/gene-fusions-explorer/tumors-explorer/