SAMD1 (sterile alpha motif domain containing 1)

2014-11-01  

Identity

HGNC
SAMD1
LOCATION
19p13.12
LOCUSID
90378
ALIAS
-

Other Information

Locus ID:

NCBI: 90378
HGNC: 17958
Ensembl: ENSG00000141858

Variants:

dbSNP: 90378
ClinVar: 90378
TCGA: ENSG00000141858
COSMIC: SAMD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000141858ENST00000269724F8WDT5
ENSG00000141858ENST00000533683E9PIW9

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
379046752023SAMD1 attenuates antiphospholipid syndrome-induced pregnancy complications.0
379046752023SAMD1 attenuates antiphospholipid syndrome-induced pregnancy complications.0
340069292021The miR-378c-Samd1 circuit promotes phenotypic modulation of vascular smooth muscle cells and foam cells formation in atherosclerosis lesions.12
340069292021The miR-378c-Samd1 circuit promotes phenotypic modulation of vascular smooth muscle cells and foam cells formation in atherosclerosis lesions.12
277030042016Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.7
277030042016Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.7
161595942005Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.10
161595942005Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.10

Citation

Dessen P

SAMD1 (sterile alpha motif domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72961/case-report-explorer/hgnc