TTC38 (tetratricopeptide repeat domain 38)

2014-11-01  

Identity

HGNC
TTC38
LOCATION
22q13.31
LOCUSID
55020
ALIAS
LL22NC03-5H6.5
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55020
HGNC: 26082
Ensembl: ENSG00000075234

Variants:

dbSNP: 55020
ClinVar: 55020
TCGA: ENSG00000075234
COSMIC: TTC38

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000075234ENST00000381031Q5R3I4
ENSG00000075234ENST00000417709F8WBU8
ENSG00000075234ENST00000421359A9UJP8
ENSG00000075234ENST00000422713H7C2L7
ENSG00000075234ENST00000451998H7C089
ENSG00000075234ENST00000629918F8WBU8

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
283714102017New genes associated with rheumatoid arthritis identified by gene expression profiling.9
283714102017New genes associated with rheumatoid arthritis identified by gene expression profiling.9

Citation

Dessen P

TTC38 (tetratricopeptide repeat domain 38)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75290/js/lib/tumors-explorer/case-report-explorer/