ZNF548 (zinc finger protein 548)

2014-11-01  

Identity

HGNC
ZNF548
LOCATION
19q13.43
LOCUSID
147694
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 147694
HGNC: 26561
Ensembl: ENSG00000188785

Variants:

dbSNP: 147694
ClinVar: 147694
TCGA: ENSG00000188785
COSMIC: ZNF548

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000188785ENST00000336128Q8NEK5
ENSG00000188785ENST00000366197Q8NEK5
ENSG00000188785ENST00000594668M0QY53
ENSG00000188785ENST00000594693M0R354
ENSG00000188785ENST00000596282M0QX17
ENSG00000188785ENST00000597047M0R1K1
ENSG00000188785ENST00000597400M0R3F2
ENSG00000188785ENST00000598895M0QXE2
ENSG00000188785ENST00000600442M0QYA3
ENSG00000188785ENST00000600927M0R041
ENSG00000188785ENST00000602086M0R2J6

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

ZNF548 (zinc finger protein 548)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76225/gene-fusions-explorer/gene-fusions/?id=76225