ZNF678 (zinc finger protein 678)

2014-11-01  

Identity

HGNC
ZNF678
LOCATION
1q42.13
LOCUSID
339500
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 339500
HGNC: 28652
Ensembl: ENSG00000181450

Variants:

dbSNP: 339500
ClinVar: 339500
TCGA: ENSG00000181450
COSMIC: ZNF678

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000181450ENST00000343776Q5SXM1
ENSG00000181450ENST00000397097Q5SXM1
ENSG00000181450ENST00000440339B1APK8
ENSG00000181450ENST00000608949V9GYU6

Expression (GTEx)

0
1
2
3
4
5
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
205466122010The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature.28
208462172010Association of linear growth impairment in pediatric Crohn's disease and a known height locus: a pilot study.10
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
205466122010The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature.28
208462172010Association of linear growth impairment in pediatric Crohn's disease and a known height locus: a pilot study.10

Citation

Dessen P

ZNF678 (zinc finger protein 678)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76327/case-report-explorer/tumors-explorer/